Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01824 ATGGACTTGGTATCTAGTTGTAAGGAAAAATTGAATTCTTTTCGCATAAAAGAGCTCAAAGATGTGCTCACTCAATTGGGACTTTCAAAGCAGGGAAAGAAGCAGGATCTCGTTGATAGGATATTGTCTATTCTCTCAGATGAACAGGCTTCCAAAATGTGGGCTAAGAAGAATGTTATTGGGAAAGAACAGGTGGCAAAATTAGTGGATGATACCTTTAGAAAATTGCAGGTATCTGGGGCCATTGATTTAGCATCAAAGGGACAGGGTTCCTCCCCAGATGTCAGTAATGTTAAAATTAAAGGTGAAGTTGATGAGGTCTTTCAGGAAGACACAAAGATTCGGTGTCTTTGTGGTAGTTCGTTGGAAACTGATCCACTGATAAAGTGTGAGGATACAAGATGCCATGTGTGGCAGCACATTAACTGTGTTATTATTCCAGAGAAACCTATGGAACCAATTCCACCCCTTCCTCAAAAATTTTACTGTGAACTCTGTCGACTCACTCGTGCAGATCCGTTTTGGGTTTCAGTGGCCACCCCTATGTTTCCTGTGAAGTTGACTACAACCCATATTCCAACTGATGGAGCCAACCCAGTGCAGAGTGTGGATAGAACATTTCAACTTACAAGGGCAGACAAGGACTTGGTATCAAGACCAGAATTTGATGTTCAGGCCTGGTGCATGCTGCTGAACGACAAAGTTTCATATAGGATGCAATGGCCACAATATACAGACCTGCAGGTCAATGGTGTTCCTGTTCGTGTGATTAACCGACCTGGTTCACAACTGCTCGGGGCTAACGGCCGTGACGATGGCCCAATTATCACGCCATATACAAAAGACGGAATTAATAAGATTTCCTTAACAGGGTGTGATGCTCGCATTTTCTGTTTAGGGGTCCGTATTGTTAAAAGGCGTAGCTTGCAACAGATCCTAAACACAATTCCCAAGGAGTCTGATGGGGAGCGTTTTGAAGATGCTCTTGCACGTGTATGTTCTCGTGTTGGGGGTGGAAATGCAGATGATAATGCTGACAGTGACAGTGATTTGGAAGTGGTCTCAGATACTTTTACCATCAACCTTCGTTGTCCAATGAGTGGTTCAAGAATGAGGGTTGCAGGAAGATTCAAACCTTGTGCTCACATGGGTTGCTTTGATCTTGAAATTTTTGTGGAAATGAATCAACGCTCAAGGAAGTGGCAATGTCCCATATGTCTTAAAAACTATGCATTGGAGGATATCATTATTGACCCTTATTTTAATCGGATAACTTCTATGATGAGAAATTGTGGGGAAGATGTTACTGAAATTGAGGTGAAGCCTGATGGTTATTGGCGTGCCAAGGCTAAGAGTGAAAGTGAACACCGGGAGTTAGGGAATCTTGTTCAATGGCACTGTCCTGATGGATCCCTGGCTCTTTCTACCAATGGAGAAGTCAATGGAATGGAGGCTTTAAAGCTCAAACAGGAAGATGTTTCGGACACTCCAACTGGTCTAAGAATTGGCATGAAGAAGAATCATGATGGAGTTTGGGTATTCAGCAAACCTGAGGACACAAATACCTCATCTGGCAATGGATTGAACAAAGATTTTGGAAATCATGATCATGTGGTTATACCAATGAGCAGCAGTGACACTGTAAGTGGTCGGGAAGGTGATGATCCTAGTGTAAATCAGGGTGTCGGTGGGCATATTGATTATTCTCCTACCAATGGGATTGAGATGGATTCAGTGCCTCACAATAATGTTGATTCAGCTTATGGATATACTGTACCTAACCCTTCTGCTCTGGCAGCTGATGCAGAAGTTATTGTTCTCTCTGATTCAGAAGACGACAATGATATATTGGTATCTTCTACAATTGAGTATAAAAATAATGAAACTGGTGCCGCTGATACTGATATTTACTCAATGCCACAGCCTGGAATTATTGATTCATATACAGATCACAATCTTGGTGGAAATCCATGCTTAGGGCTCTTCAGTAACCCCAATGAAGATGATTTTGGGATGCCTTCTTCCATCTGGTCATTGCCTTCAGGAACTCAGGCTGGCTCAGGATTCCAGTTATTTAGTTCAGATGCAGATGTCTCGGATGCATTGGTCCACTTGCAAAATGGTGATTTAAATGGTTATACGTTAGCTTCAGATACTTCTGCTTTGGAATCCAATTCTTTGATACAGGATTCCTCTGCAGGTCGATCTGATGCTGATTTAAATGGTGGTTTGGTTGGTGGTTTGGTAGACAATCCTCTGGCATTTGCTGGAGAAGATCCCTCACTTAAGATTTTTCTTCCAACAACACCACTGGAATCATCTGTGCAGCATGAATCAAGAGAACAGGCAGATGTGTCAAATGGTGTCTGCACTGATGATTGGATCTCTCTTAGGCTTGGAGGTGGTGCTGGTGGAAGTAATGGTAATGGTTCTGTCCCCAGTGGGTTGAATTCCAGATCGCAGGCGACATCCAGAGGAGGTGCAACAGACACATTGACAGATACTGGTTCTTTGCTGCTTGGTATGAATGATGCTAGATCTGACAAAGCAAGTAGGCCAAGATCTGACAGCCCATTCTCATTTCCCCGCCAAAAACGTTCAAAACTGAAGAAAGCTGAGCAGCGATATTGGTGCTCAGGAAATGGAAGTTGA 2652 0.4299 MDLVSSCKEKLNSFRIKELKDVLTQLGLSKQGKKQDLVDRILSILSDEQASKMWAKKNVIGKEQVAKLVDDTFRKLQVSGAIDLASKGQGSSPDVSNVKIKGEVDEVFQEDTKIRCLCGSSLETDPLIKCEDTRCHVWQHINCVIIPEKPMEPIPPLPQKFYCELCRLTRADPFWVSVATPMFPVKLTTTHIPTDGANPVQSVDRTFQLTRADKDLVSRPEFDVQAWCMLLNDKVSYRMQWPQYTDLQVNGVPVRVINRPGSQLLGANGRDDGPIITPYTKDGINKISLTGCDARIFCLGVRIVKRRSLQQILNTIPKESDGERFEDALARVCSRVGGGNADDNADSDSDLEVVSDTFTINLRCPMSGSRMRVAGRFKPCAHMGCFDLEIFVEMNQRSRKWQCPICLKNYALEDIIIDPYFNRITSMMRNCGEDVTEIEVKPDGYWRAKAKSESEHRELGNLVQWHCPDGSLALSTNGEVNGMEALKLKQEDVSDTPTGLRIGMKKNHDGVWVFSKPEDTNTSSGNGLNKDFGNHDHVVIPMSSSDTVSGREGDDPSVNQGVGGHIDYSPTNGIEMDSVPHNNVDSAYGYTVPNPSALAADAEVIVLSDSEDDNDILVSSTIEYKNNETGAADTDIYSMPQPGIIDSYTDHNLGGNPCLGLFSNPNEDDFGMPSSIWSLPSGTQAGSGFQLFSSDADVSDALVHLQNGDLNGYTLASDTSALESNSLIQDSSAGRSDADLNGGLVGGLVDNPLAFAGEDPSLKIFLPTTPLESSVQHESREQADVSNGVCTDDWISLRLGGGAGGSNGNGSVPSGLNSRSQATSRGGATDTLTDTGSLLLGMNDARSDKASRPRSDSPFSFPRQKRSKLKKAEQRYWCSGNGS 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01824 883 SUPERFAMILY SAP domain 1 63 IPR036361 -
Arst8g01824 883 CDD PHD_Bye1p_SIZ1_like 115 166 - -
Arst8g01824 883 CDD SP-RING_Siz-like 361 410 IPR031141 -
Arst8g01824 883 SMART sap_9 11 45 IPR003034 -
Arst8g01824 883 SMART PHD_3 115 167 IPR001965 -
Arst8g01824 883 MobiDBLite consensus disorder prediction 801 883 - -
Arst8g01824 883 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 172 IPR013083 -
Arst8g01824 883 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 332 449 IPR013083 -
Arst8g01824 883 Pfam SAP domain 11 42 IPR003034 -
Arst8g01824 883 ProSitePatterns Zinc finger PHD-type signature. 116 166 IPR019786 -
Arst8g01824 883 ProSiteProfiles SAP motif profile. 11 45 IPR003034 -
Arst8g01824 883 ProSiteProfiles Zinc finger SP-RING-type profile. 347 430 IPR004181 GO:0008270
Arst8g01824 883 SUPERFAMILY FYVE/PHD zinc finger 107 170 IPR011011 -
Arst8g01824 883 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 9 664 - -
Arst8g01824 883 Pfam MIZ/SP-RING zinc finger 360 408 IPR004181 GO:0008270
Arst8g01824 883 Gene3D SAP domain 1 62 IPR036361 -
Arst8g01824 883 FunFam E3 SUMO-protein ligase SIZ1 1 66 - -
Arst8g01824 883 MobiDBLite consensus disorder prediction 807 840 - -
Arst8g01824 883 MobiDBLite consensus disorder prediction 847 873 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01824 Arst-Chr8 26653700 26661999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01824 - - gmx:100793735 1275.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01824 8 26653700 26661999 Arst8g01824 8 26653700 26661999 ECH
Arst8g01824 8 26653700 26661999 Arst3g00240 3 1668696 1677945 PCT