Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01820 ATGGGAAACAGAAACAGCCTTTTGTTTTTTATCCTTGTTCTGATGTGTCATGGTGTAACCTTGACAATGGGGTTATGGAGGAAACATGATGATGTAGAAACGATGTTCTTGATGAAGAACTCCAAGAGTGTGGTTAAGACAGATGCTGGTGAGATGAGAGTTCTTGAAAGCTATGGTGATGCTAAGCTTATGGAGAGGCGCTTGCATATTGGATTCATCTCCATGGAGCCAAGGTCACTCTTCGTTCCTCAGTATATTGACTCAAGCTTCATCATTTTCCTCCATGAAGGGGAAGCAAAGCTGGGATTCATGTATAGAGGTAAGCTTGCAGAAAGAACATTGAAGATGGGGGATGTGTATAGAATCCCAGCTGGTTCAGCATTCTATTTGGTGAATATTGGTGAAGGTCAGAAACTTCACATTATCTGCAGCATTGATCCCTCAGAGGCAGTGGGAGTTGGTACTTTCCAGTCCTTCTATCTTGGAGGAGGAGCAAATCCAGCTTCAGTACTTTCCGGCTTCGGAACAGATATCCTTGAAGCTGCCTTTAATGTATCAGCAGAAGAAGTTAGGAAAATGTTCACAAGGCAACATGAGGGTCCAATTGTGAATCTGGATCAGCAAGACACAGGTTTGTGGAGCAAGTTCCTTCAATTGAAGGATGAGGACAAATTGCAACACCTGAAGGGAATGGTGCTAGACCAGCAAGAAGAAGATTTTGATGATGAAGATAATGATGGACAAGAAGAGGAGAAGCAAAGAGTATGGTCATGGAGGAAGCTCTTAGACTCAGTTGTTTGTGATGAGTTAAAGAAAGCATGGAACCCCAACAAGGGTATGGGTAAGAAGCCCCCTCATATTTGCAACCTCTATGACAGAGCACCAGATTTCATCAACAGCCATGGTTGGAGTGTTGCTGTTGATGGCTCAGATTATTCTCCACTCAAAATGTCTGGTGTTGGCATTTATCATGTTAATCTCTCAGCGGGAGCGATGATGACGCCGCACATGAATCCAATGGCAACAGAGTATGGCATAGTGTTGAGAGGGAGTGGAAGAATCCAGATAGTGTTTCCAAACGGAACCAATGCAATGGATGCAGAGATCAAAGAAGGGGATGTGTTCTTTATCCCAAGGTACTTCCCTTTCTGCCAAATAGCATCAAAGGACCAACCATTGGAGTTCTTTGGCTTCACCACCTCTGCAAGTAAGAACAGGCCACAGTTTCTTGTGGGAGCCACGTCACTCATGAGGACCATGATGGGTCCTGAGCTCGCTGCTGCCTTTGGTGTGAGCGAGGAAACCATGCGCCACATGGTTGATGCGCAGCATGAGGATGTCATACTTCCATATCCACATCATCAAGATCATAACAAGGAAGTGGTTGAGGTTGACACCATTCCAAAGCTTATAAGGAATGCCATGGTTTTGGGATGGTAA 1440 0.4465 MGNRNSLLFFILVLMCHGVTLTMGLWRKHDDVETMFLMKNSKSVVKTDAGEMRVLESYGDAKLMERRLHIGFISMEPRSLFVPQYIDSSFIIFLHEGEAKLGFMYRGKLAERTLKMGDVYRIPAGSAFYLVNIGEGQKLHIICSIDPSEAVGVGTFQSFYLGGGANPASVLSGFGTDILEAAFNVSAEEVRKMFTRQHEGPIVNLDQQDTGLWSKFLQLKDEDKLQHLKGMVLDQQEEDFDDEDNDGQEEEKQRVWSWRKLLDSVVCDELKKAWNPNKGMGKKPPHICNLYDRAPDFINSHGWSVAVDGSDYSPLKMSGVGIYHVNLSAGAMMTPHMNPMATEYGIVLRGSGRIQIVFPNGTNAMDAEIKEGDVFFIPRYFPFCQIASKDQPLEFFGFTTSASKNRPQFLVGATSLMRTMMGPELAAAFGVSEETMRHMVDAQHEDVILPYPHHQDHNKEVVEVDTIPKLIRNAMVLGW 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01820 479 Gene3D Jelly Rolls 28 218 IPR014710 -
Arst8g01820 479 CDD cupin_7S_vicilin-like_N 44 208 - -
Arst8g01820 479 Gene3D Jelly Rolls 280 452 IPR014710 -
Arst8g01820 479 CDD cupin_7S_vicilin-like_C 295 445 - -
Arst8g01820 479 SMART Cupin_1_3 36 191 IPR006045 -
Arst8g01820 479 SMART Cupin_1_3 288 437 IPR006045 -
Arst8g01820 479 PANTHER OS03G0336100 PROTEIN-RELATED 8 452 - -
Arst8g01820 479 Pfam Cupin 289 436 IPR006045 -
Arst8g01820 479 Pfam Cupin 41 190 IPR006045 -
Arst8g01820 479 SUPERFAMILY RmlC-like cupins 42 445 IPR011051 -
Arst8g01820 479 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01820 Arst-Chr8 26595098 26597484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01820 43 449 Miscellaneous Gene Families AT2G18540 30.496 6.13e-45 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01820 - - gmx:100818796 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01820 8 26595098 26597484 Arst8g01820 8 26595098 26597484 ECH
Arst8g01820 8 26595098 26597484 Arst3g00244 3 1752682 1755778 PCT