Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01784 ATGTTTCCAGGAAAATTTTTCCAATTTTGTGGCAGTGGCATATCCGAAGACGATGAGAGGAATAAGGGCAGAGTTGGTTTGAATGTGAAAGCGAATGTTAAAAGAGAAGGCAATTCCAATGATGATGAAAATCAACTTTCTTTGGACGTGAAGAAGTTGAATTTGAGAGATAACAATGGAAACCCCAGCAACGTCAACAAAGCGATGACCTTTACTTTTGATGAGCTTGCAGCTGCAACAGGGAATTTCAGGCCTGATTGTTTTCTTGGTGAAGGAGGTTTTGGCAAGGTTTACAAGGGCCACTTGGAGAGCATAAACCAGGTTGTAGCTATAAAGCAACTTGACCCTCATGGCCTTCAAGGAATTAGGGAATTTGTTATAGAAGTTTTGACTTTGAGTTTGGTAGATCATCCTAATCTTGTCAAGTCGATTGGGTTTTGCGCCGAGGGAGATCAGAGGCTATTGGTTTATGAGTACATGCCATTGGGATCTTTGGAGCACCATTTACATGATCTTCCACCGGGAAAAAGACCGATAAGTTGGAATACAAGGATGAAAATCGCGGCCGGTGCAGCGAAGGGGTTGGAGTATTTGCATGATAAAATGAAGCCTCCTGTCATTTACCGTGATCTGAAATGCTCTAACATTTTGCTAGATGAGAAATATCATGCCAAATTGTCTGATTTCGGCTTAGCGAAAGTAGGCCCAAGTGGTGATAAGTCTCATGTTTCGACGAGGGTTATGGGCACATATGGTTATTGTGCTCCAGATTATGCAATGACGGGTCAGTTGACATTCAAGTCTGATATTTACAGCTTTGGTGTTGTTCTTTTGGAGCTCATCACAGGAAGGAAAGTCATCGACCATAGAAGACCTGAAAAGGAAGAAAATCTAGTTGCATGGGCAAGGCCTTTATTCAAAGACCGGAAAAGATTCGCAGAGATGGTTGATCCATTGCTTGAAGGTAAATATCCAGTGAGAGGCCTGTACCAAGCTCTTGCCATTGCCGCGATGTGTCTACAAGAACAGCCTAATATGCGGCCTAACACGGCCGATGTGGTTACAGCTCTAGACTTCCTTGCTTCGCAGAAATACGATCCTCACACTTATTCAGTCTCAAAAAGTCCATCTCCAAATCAGAAAATGGATGACCAATGGTGTGTCGCAAGCACCGGTTCTGAGACAGAAAGGAGTGATGACCCCGAATGTTCTGTTAGAAATGGTTCTGAGATATGA 1236 0.4312 MFPGKFFQFCGSGISEDDERNKGRVGLNVKANVKREGNSNDDENQLSLDVKKLNLRDNNGNPSNVNKAMTFTFDELAAATGNFRPDCFLGEGGFGKVYKGHLESINQVVAIKQLDPHGLQGIREFVIEVLTLSLVDHPNLVKSIGFCAEGDQRLLVYEYMPLGSLEHHLHDLPPGKRPISWNTRMKIAAGAAKGLEYLHDKMKPPVIYRDLKCSNILLDEKYHAKLSDFGLAKVGPSGDKSHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKVIDHRRPEKEENLVAWARPLFKDRKRFAEMVDPLLEGKYPVRGLYQALAIAAMCLQEQPNMRPNTADVVTALDFLASQKYDPHTYSVSKSPSPNQKMDDQWCVASTGSETERSDDPECSVRNGSEI 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01784 411 MobiDBLite consensus disorder prediction 369 411 - -
Arst8g01784 411 Pfam Protein kinase domain 89 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01784 411 SUPERFAMILY Protein kinase-like (PK-like) 66 376 IPR011009 -
Arst8g01784 411 MobiDBLite consensus disorder prediction 369 394 - -
Arst8g01784 411 FunFam probable serine/threonine-protein kinase RLCKVII 55 159 - -
Arst8g01784 411 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Arst8g01784 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Arst8g01784 411 FunFam Serine/threonine-protein kinase PBS1 160 375 - -
Arst8g01784 411 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01784 411 Gene3D Transferase(Phosphotransferase) domain 1 160 376 - -
Arst8g01784 411 PANTHER OS07G0668900 PROTEIN 44 369 - -
Arst8g01784 411 MobiDBLite consensus disorder prediction 395 411 - -
Arst8g01784 411 SMART serkin_6 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01784 411 Gene3D Phosphorylase Kinase; domain 1 52 159 - -
Arst8g01784 411 CDD STKc_IRAK 89 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01784 Arst-Chr8 26210775 26213665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01784 35 362 Glycoside Hydrolase AT3G07070 62.195 9.16e-148 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Arst8g01784 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01784 - - gmx:100794680 580.482