Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01489 ATGAATTTGCAACAAGCTGGGCAGCCTAAATCTTCTAATGGATATGGGCGTCGAAAATCTGAAAGAGAAGGGGCAACAAAGTCAGAGAACAAAATCCCATCTGGAAAATTAAATTCCGCCAGATTAGCAAGTACAGGTGCTGTGACTGGCTGTAAAGGTGGTGGCTATGAGAGTCCTTCACATGATCGTCTAGTATATGTAACAACATGTCTTATTGGGCACCAGGTGGAAGTTCAGGTGAAAAATGGGTCAATGTACTCTGGAATATTTCATGCAACAAACGCTGACAATGATTTTGGAATTGTTTTGAAAATGGCTCGCTTAATTAAGGATGGTTCTTTAAGAGGGCAGAAGTCTAGTGCAGAACCTGTCAGCAAGGCTCCTTCTAAGATCTTAATTATACCTGCCAAAGAACTTGTACAAGTTATAGCAAAGGGAGTTGCCGTTACTAGGGATGGCCTACCTAGTGAATTGCATCATGATATGCATCAGGAAATCATGGTAGATTCGTTAATATCTCATTCTCGACATGTTGAGTTAGGGAGAGAATTGAAACCCTGGGTACCTGATGAAGATGTTCCACAATGCCCAGAACTGGAAAATACCTTTGATGGTCCTTGGAATAGGGGATGGGATCAGTTTGAAACAAATGAGGCCTTGTTTGGTGTAAAAAGCACATTCAATGAGGAACTATATACCACAAAGCTTGAAAAAGGGCCCCGGACAAGAGAACTGGAAAAACAAGCCTTAAGAATAGCAAGAGAAATTGAGGGTGAGGAAACCCAAGATCTGCATCTTGCGGAGGAAAGAGGACTTCACTTTCATGAAAACTTTGATATTGATGAAGAAACTAGATTCTCTTCAGTCGCTAGGGGTAAAGGTGTTGATGATAGCGGATATGATGAAAATGAGGACATACTGTCTGATTCACTCAATTCTGAAACCTTTGGTGGTATACTTGGCTCAGTAGGTAAGGGACCTGGTGAAATAACTGGTGGAAAAGGGAATGATGGAGCACTAGCAAATTCGTCCTCTTTGGATCTTCCACAGTCATCTCAATCAAGCACTGGTGTGGATTTAAGCCGCTCTGGTTCTTATGATCATGCCAAGCAATTGGCATCGGAACTCCCTACTAAAATCTACTCATCTTCAGACGAGGAAAACAGGATTCAGGATCATTTGGCCAGTGATCTACATAGATCCAGTGGTAATAACAAGGAAGAAAATCAGAAACAATCTGAGGATGTTCAACTGTCAAAATCTGAAGATTTACATGCATCACTCCACTCGAAGAAAGATGGCTCTGATAAAGGGGTATTATCTTCTAATGTCACCCCTTATGCCGCTTCATCTCATGTTCCATCAAAGACTCACGAAAAGACTGGCTCACCTGGGGATTTGACTCAGCGTTCACTTGCTGGAAAAATTAATGGGGAAACAAAGTTTGTAAGTCCACGTGGGACATCATCTGCTTCAGATTCTGTGGGAGGTGTGGCAGCATCCTCTGGTCTTGGTTTGTCTCCAAGTTCATCTGTTGGTTCATTGTCTTCTGAAAAATCAACTCTTAATCCCAATGCCAAGGAATTCAAGCTCAATCCTAATGCAAAGAGTTTTGTTCCCTCTCAAACACCTGTTCGGCCTCCTACCCCCGTGTCCGACGGTTCCTTTTATTTTCCACCCAATGTATCTACTGTACCAAATATGCCAGGCATGCCCATGAGTATTGGAGTTGGACCTACTTTTACTGGGCCACAACACATGATATATAATCCGCAGGTAGCGCAAATGCCATCTCAACCATATTTTCATCCAAATGGCCCACAGTATGGTCAGCTTATTGGTCATCCTAGGCAGGTTTTATACATGCCGAGTTACCTACCTCCTGAAATGCCATACAAGGGACGGGATTATTGA 1914 0.4263 MNLQQAGQPKSSNGYGRRKSEREGATKSENKIPSGKLNSARLASTGAVTGCKGGGYESPSHDRLVYVTTCLIGHQVEVQVKNGSMYSGIFHATNADNDFGIVLKMARLIKDGSLRGQKSSAEPVSKAPSKILIIPAKELVQVIAKGVAVTRDGLPSELHHDMHQEIMVDSLISHSRHVELGRELKPWVPDEDVPQCPELENTFDGPWNRGWDQFETNEALFGVKSTFNEELYTTKLEKGPRTRELEKQALRIAREIEGEETQDLHLAEERGLHFHENFDIDEETRFSSVARGKGVDDSGYDENEDILSDSLNSETFGGILGSVGKGPGEITGGKGNDGALANSSSLDLPQSSQSSTGVDLSRSGSYDHAKQLASELPTKIYSSSDEENRIQDHLASDLHRSSGNNKEENQKQSEDVQLSKSEDLHASLHSKKDGSDKGVLSSNVTPYAASSHVPSKTHEKTGSPGDLTQRSLAGKINGETKFVSPRGTSSASDSVGGVAASSGLGLSPSSSVGSLSSEKSTLNPNAKEFKLNPNAKSFVPSQTPVRPPTPVSDGSFYFPPNVSTVPNMPGMPMSIGVGPTFTGPQHMIYNPQVAQMPSQPYFHPNGPQYGQLIGHPRQVLYMPSYLPPEMPYKGRDY 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01489 637 MobiDBLite consensus disorder prediction 323 369 - -
Arst8g01489 637 MobiDBLite consensus disorder prediction 337 362 - -
Arst8g01489 637 MobiDBLite consensus disorder prediction 482 529 - -
Arst8g01489 637 Pfam Ataxin-2 C-terminal region 518 529 IPR009818 -
Arst8g01489 637 PANTHER ATAXIN 2-RELATED 38 633 IPR045117 GO:0003723
Arst8g01489 637 Coils Coil 242 262 - -
Arst8g01489 637 SMART LsmAD_2 221 292 IPR009604 -
Arst8g01489 637 FunFam Polyadenylate-binding protein-interacting protein 3 65 138 - -
Arst8g01489 637 Pfam Ataxin 2 SM domain 61 145 IPR025852 -
Arst8g01489 637 Pfam LsmAD domain 221 291 IPR009604 -
Arst8g01489 637 MobiDBLite consensus disorder prediction 15 29 - -
Arst8g01489 637 MobiDBLite consensus disorder prediction 396 436 - -
Arst8g01489 637 MobiDBLite consensus disorder prediction 1 38 - -
Arst8g01489 637 MobiDBLite consensus disorder prediction 396 529 - -
Arst8g01489 637 Gene3D - 68 138 - -
Arst8g01489 637 MobiDBLite consensus disorder prediction 437 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01489 Arst-Chr8 24046193 24052516 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01489 - - gmx:100812754 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01489 8 24046193 24052516 Arst8g01489 8 24046193 24052516 ECH
Arst8g01489 8 24046193 24052516 Arst9g01141 9 12920081 12928687 PCT