Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01468 ATGGGAATCCCTGGTGCATTTTACATCAAGAACTATATGCAAGTTGAGTTTTTCCTCAAGACCTTAACTCTTGAAGATGTTCCAAACCAAGGAACCATCCATTTTGTTTGCAACTCTTGGGTTTACAACTCTAAACTCTACAAATCCCCACGCATTTTCTTCTCCAACAAGCCATATCTTCCAAGTGAAACACCAGCTCCACTTGTTAAGTACAGAGAAGAAGACCTGAAAAATTTAAGAGGTGATGGAAAAGGAGAGCGTCAGGAGCATGAAAGAATTTATGATTATGATGTCTACAATGATTTGGGGAATCCGGATCGGAACGAAAACCATGCTTGCCCCATTCTTGGAGGTTCTACCACTTTCCCTTACCCTCGCAGGGGAAGAACTGGTAGATATCCTGCAAGAAATGATCCTAACAGCGAGAAACCAGGGGATGTTTATGTTCCTAGAGATGAAAACTTTGGACACTTGAAATCTTCGGACTTTCTTGCAAATTCAATAAAGTTTTTGACTCGGTATGTGCTGCCAGCTTTTGAATCTGTGTTTGATATGAATTTGACCCCAAATGAGTTTGATAGCTTCCAAGATGTTCGTGATCTCTATGAAGGCGGAATTAGGCTACCTACGGAAGTAATTAGCACAATTAGCCCCTTACCTGTCATCAAAGAACTCTTCCGTACCAATGGCGAACAAGTCCTCAAGTTTCCACCACCTCACATCATTCAAGTGAATAAATCTGCATGGATGACTGATGAAGAATTCGCAAGAGAAATGATTGCTGGTGTAAATCCTTGCATGATTCGTAGTCTTCAAGAGTTTCCTCCGAAAAGAAATTTGGATCCCACAATTTATGGTGATCAAAACAGTAAGATAACTGCAGAAGTTCTTGATCTTGAAGGGTGCTCACTAGAAGAGGCAATTAATGGTCGGAGACTATTTATATTAGATTACCATGATGTGTTGGCATATGCCACTAGGACTATCCTTTTTCTGAAAGAGGATGGAACACTGAAGCCAGTGGCCATTGAATTAAGCTTGCCACATCCTGATGGAGATGAATCAGGTGCTACCAGTAAAGTTATCTTACCTGCAAAGGATGGTGTTGAAAGCACAATTTGGCTACTAGCCAAAGCTTATGTCATAGTAAATGACTCATGCTACCATCAACTCATGAGCCATTGGTTGAATACTCATGCAGTTATTGAGCCATTTGTGATAGCAACAAACAGACAGCTAAGTGTGATTCACCCAATTTATAAACTTTTCTTCCGTGACACTATGAACATCAATGCACTTGCTAGGCAGAATCTGATTAATTCTGATGGCATAATAGAAAGAACCTTCTTGCCCTCCAAGTTTTCTCTGGAGATGTCTTCAGCTGTTTATAAGAACTGGGTTTTCACTGATCAAGCACTACCTGCTGATCTCATCAAGAGAGGAATGGCAGTGGAGGATTCATCTTCTCCTTATGGAATTCGTCTTGTAATAGAGGACTACCCTTATGCTGTTGATGGACTAGAGATATGGTTTGCCATTAAGGAATGGGTTCAAGATTATGTCTCATTGTACTATCCAACAGACAATGATCTCAAAATAGATCCTGAACTCCAAAATTGGTGGAAAGAAGCTGTTGAGGTAGGTCATGGTGATTTGAAAGATAAGCCATGGTGGCCAAAGATGCAGACAGTTGAAGAGTTAGTTGAATCATGCACAACCATAATATGGACTGCGTCGGCGCTCCATGCAGCCGTTAATTTTGGACAGTATCCATATGGAGGGCTTATACTGAACCGTCCAACACTTAGCAGAAGATTGCTTCCTGAACAAGGCACTGCAGAGTATGAAGAGATGGTGAAGAGTCACCAAAAGGCTTATCTGAGAACAATTACACCGAAATTAGAGACTCTTATTGACCTTACAACCATAGAAATCTTATCAAAACATGCTTCTGATGAGGTGTATCTTGGAGAGATGGATAATCCACATTGGACATTTGATTCAAGAGCATTACAAGCATTTCAGAAATTTGGGAACAAACTGAGTGAGATTGAGGAGAAGCTAACAGAGAAGAACAAAGATGGGAGACTGAGTAATAGAATTGGGCCAGTTGAATTGCCATACACGCTTCATCCTACTAGCAATGAAGGGTTGACTTTTAGAGGAGTTCCAAACAGCATCTCTATCTAA 2190 0.4068 MGIPGAFYIKNYMQVEFFLKTLTLEDVPNQGTIHFVCNSWVYNSKLYKSPRIFFSNKPYLPSETPAPLVKYREEDLKNLRGDGKGERQEHERIYDYDVYNDLGNPDRNENHACPILGGSTTFPYPRRGRTGRYPARNDPNSEKPGDVYVPRDENFGHLKSSDFLANSIKFLTRYVLPAFESVFDMNLTPNEFDSFQDVRDLYEGGIRLPTEVISTISPLPVIKELFRTNGEQVLKFPPPHIIQVNKSAWMTDEEFAREMIAGVNPCMIRSLQEFPPKRNLDPTIYGDQNSKITAEVLDLEGCSLEEAINGRRLFILDYHDVLAYATRTILFLKEDGTLKPVAIELSLPHPDGDESGATSKVILPAKDGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAVIEPFVIATNRQLSVIHPIYKLLXFRDTMNINALARQNLINSDGIIERTFLPSKFSLEMSSAVYKNWVFTDQALPADLIKRGMAVEDSSSPYGIRLVIEDYPYAVDGLEIWFAIKEWVQDYVSLYYPTDNDLKIDPELQNWWKEAVEVGHGDLKDKPWWPKMQTVEELVESCTTIIWTASALHAAVNFGQYPYGGLILNRPTLSRRLLPEQGTAEYEEMVKSHQKAYLRTITPKLETLIDLTTIEILSKHASDEVYLGEMDNPHWTFDSRALQAFQKFGNKLSEIEEKLTEKNKDGRLSNRIGPVELPYTXLHPTSNEGLTFRGVPNSISI 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01468 731 FunFam Lipoxygenase 368 730 - -
Arst8g01468 731 Gene3D PLAT/LH2 domain 1 59 - -
Arst8g01468 731 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 58 731 IPR013819 GO:0016702|GO:0046872
Arst8g01468 731 PANTHER LIPOXYGENASE 5 731 IPR000907 GO:0016702|GO:0034440|GO:0046872
Arst8g01468 731 FunFam Lipoxygenase 60 158 - -
Arst8g01468 731 Gene3D - 248 366 - -
Arst8g01468 731 Gene3D - 159 247 IPR027433 -
Arst8g01468 731 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 1 59 IPR036392 GO:0005515
Arst8g01468 731 Pfam Lipoxygenase 68 714 IPR013819 GO:0016702|GO:0046872
Arst8g01468 731 SMART LH2_4 1 56 IPR001024 GO:0005515
Arst8g01468 731 PRINTS Plant lipoxygenase signature 51 72 IPR001246 GO:0016491
Arst8g01468 731 PRINTS Plant lipoxygenase signature 25 43 IPR001246 GO:0016491
Arst8g01468 731 PRINTS Plant lipoxygenase signature 234 250 IPR001246 GO:0016491
Arst8g01468 731 PRINTS Plant lipoxygenase signature 90 106 IPR001246 GO:0016491
Arst8g01468 731 PRINTS Plant lipoxygenase signature 189 210 IPR001246 GO:0016491
Arst8g01468 731 PRINTS Plant lipoxygenase signature 273 292 IPR001246 GO:0016491
Arst8g01468 731 PRINTS Plant lipoxygenase signature 123 142 IPR001246 GO:0016491
Arst8g01468 731 PRINTS Plant lipoxygenase signature 644 658 IPR001246 GO:0016491
Arst8g01468 731 ProSiteProfiles PLAT domain profile. 1 55 IPR001024 GO:0005515
Arst8g01468 731 Gene3D - 367 730 - -
Arst8g01468 731 Pfam PLAT/LH2 domain 4 54 IPR001024 GO:0005515
Arst8g01468 731 Gene3D - 60 158 - -
Arst8g01468 731 SUPERFAMILY Lipoxigenase 60 731 IPR036226 -
Arst8g01468 731 MobiDBLite consensus disorder prediction 126 149 - -
Arst8g01468 731 ProSitePatterns Lipoxygenases iron-binding region signature 1. 389 403 IPR020833 GO:0016702|GO:0046872
Arst8g01468 731 PRINTS Lipoxygenase signature 371 388 IPR013819 GO:0016702|GO:0046872
Arst8g01468 731 PRINTS Lipoxygenase signature 409 429 IPR013819 GO:0016702|GO:0046872
Arst8g01468 731 PRINTS Lipoxygenase signature 389 406 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01468 Arst-Chr8 23842524 23846661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01468 1 731 Acyl Lipid Metabolism Gene Families AT1G55020 58.235 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01468 K15718 - gmx:547774 1241.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01468 8 23842524 23846661 Arst9g02481 9 90012507 90017523 PCT