Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01417 ATGGCGAAGAGTGAGATTCGTTTTTCTACTCAGCTTATTGATGGAGATGGCACGTTCAATGTTGAGGGAATTGAGAAGTTCATGAAGGACGTTAAGTTAGCTGAATGCGGGCTTTCCTATGCCGTAGTTTCCATCATGGGTCCACAAAGTAGTGGCAAGAGTACGCTATTAAATAATTTGTTTGGCACTGATTTTAGAGAGATGGATGCATTTAAGGGAAGATCTCAAACAACCAAAGGAATTTGGTTGGCAAAATGTGCCGGCATAGAGCCTTGTACACTTGTGATGGACTTAGAGGGCACAGATGGAAGAGAAAGGGGAGAGGACGATACTGCATTTGAAAAGCAGAGTTCTCTTTTTGCTTTGGCTGTTTCGGATATTGTGCTGATAAACATGTGGTGTCATGACATCGGCCGTGAGCAAGCTGCAAACAAGCCACTTCTAAAAACTGTGTTTCAGGTCATGATGAGGTTGTTTAGTCCACGCAAAACAACATTGATGTTTGTCATACGTGATAAAACAAGGACACCACTAGAAAATTTAGAACCTGTCTTACGAGAAGATATTCAGAAGATTTGGGATTCTGTTCCTAAGCCACAGGCCCACAAGGAAACCCCACTGAGTGAATTTTTTAACGTTGAAGTTGTTGCTCTTTCTAGCTTCGAAGAGAAGGAAGAGCAATTCAAGGAGCAAGTTCATGAGTTGAGGCAGCGATTTGTTCATTCCATAAATCCTGGTGGGCTTGCGGGGGATCGGCGTGGAGTTGTTCCTGCTTCGGGCTTTTCTTTTAGTGCTCAGCAAATCTGGAAAGTCATCAAGGAGAACAAAGATCTTGACCTTCCCGCACACAAGGTCATGGTTGCTACTGTAAGATGTGAAGAAATTGCCAATGAGAAATATGCCCTTTTTGCTGCCAATGAGGACTGGCGTCAGCTAGAAGAGGCTGTGCAATCAGGTCCAGTTTCTGGATTTGGGAAAAAGCTCAATTCGCTTCTTGATACTTGTCTTTCAGAGTATGATGTTGAAGCCACTTATTTTGATGAAGGTGTGAGAACCGCTAAACAGAAGCACCTTCAAGAAAAACTGTTGCAACTTGTCCAACCAGCATTCCACTCTGCCCTTGGACATATAAGGATTGGAACTTTCGATAAGTTCAAGGAAGTATTTGATAAGGCTTTGAATAAAGGGGAAGGGTTTTCTGAAGCTGCTAATAATTGCACAGGGATTTTTATGGCTCAGTTTGATGAAGCCTGTGCAGATGTTGTTGTTGAAGTTGCAGACTGGGATACATCTAAAGTAAGGGAGAAACTACGACGTGATATTGATGCACATGTTGCATCTGTACGTGCAGCTAAGTTATCGGAACTTACCACAACATATGAGGAAAAACTAAAAGAAGCTTTGTCTGGACCTATTGAAGCACTTTTTGATGGAGCTAATAATGAAACTTGGCCATCAATAAGGAAACTCTATAAGCGTGAGACTGAATCAGCTGTTTCTGGGTTTTCTGCTGCGCTTACCAGGTTTGATGCAGATGAAGAAACACAAAAGAACATGATTGTGAGTTTAGAGAATTATGCAAGAGGTTTGATAGAGACAAAAGCTAGGGATGAAGCTTGCAGAGTCCTAATACGTATGAAGGAAAAGTTCACAACATTGTTTAGTCATGATGCTGAATCAATGCCGCGTATTTGGACAGGAAGCGAAGATATTCGATCCATCACCAAGACTGCTCGATATGCTTGCCTGAAGTTGCTATCTGTTATGACCGTAATTCGTTTGGATGATAAAGATGACACTCTTAACATTGAGAATATTTTAGCAAAAGCATTGTTAGATTCACCCAATGAAAAAGAGAAGAAAATCACAACAGTTGATCCACTGGCTTCAAGCACTTGGGAAAAGGTTCCAGCTTCTAAAACATTGATCACCCCTGTCCAGTGTAAATCTTTGTGGAGGCAATTCAAGATTGAGACAGAATATACTGTGTCTCAGGCCATTGCTGCACAGGAGGCCAACAAGCGTGGTAACAACTGGTTACCTCCACCATGGGCAATTGTTGCCTTGCTTATTCTGGGATTTAACGAGTTTATGACACTTTTAAGAAATCCTTTATATTTGATTCTCATTTTTATTGGTTATCTTCTCATTAAAGCCTTGTGGGTGCAACTTGACGTTGCGGGTGATTTTCGCCATGGTGCACTAGCTGGACTCTTATCCTTGTCTACTAAGTTTCTTCCAACTATAATGAATCTTATGAGAAAGTTAGCAGAGGAGGGGGTTCCTGAAACTAACAATCCTCAGCCAACTCCATCAACAAGTACTCAAACTACTGGTAGCTCTGTGTCATCTACTGCTTCATCTAAGGTAACTTTTTTAGAATGTGGAACTGAGTACACCGCTTCATCAAAAGAAGAATAG 2421 0.4151 MAKSEIRFSTQLIDGDGTFNVEGIEKFMKDVKLAECGLSYAVVSIMGPQSSGKSTLLNNLFGTDFREMDAFKGRSQTTKGIWLAKCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSSLFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSFEEKEEQFKEQVHELRQRFVHSINPGGLAGDRRGVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYALFAANEDWRQLEEAVQSGPVSGFGKKLNSLLDTCLSEYDVEATYFDEGVRTAKQKHLQEKLLQLVQPAFHSALGHIRIGTFDKFKEVFDKALNKGEGFSEAANNCTGIFMAQFDEACADVVVEVADWDTSKVREKLRRDIDAHVASVRAAKLSELTTTYEEKLKEALSGPIEALFDGANNETWPSIRKLYKRETESAVSGFSAALTRFDADEETQKNMIVSLENYARGLIETKARDEACRVLIRMKEKFTTLFSHDAESMPRIWTGSEDIRSITKTARYACLKLLSVMTVIRLDDKDDTLNIENILAKALLDSPNEKEKKITTVDPLASSTWEKVPASKTLITPVQCKSLWRQFKIETEYTVSQAIAAQEANKRGNNWLPPPWAIVALLILGFNEFMTLLRNPLYLILIFIGYLLIKALWVQLDVAGDFRHGALAGLLSLSTKFLPTIMNLMRKLAEEGVPETNNPQPTPSTSTQTTGSSVSSTASSKVTFLECGTEYTASSKEE 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01417 806 Gene3D - 11 246 IPR027417 -
Arst8g01417 806 FunFam Protein ROOT HAIR DEFECTIVE 3 homolog 18 273 - -
Arst8g01417 806 Coils Coil 218 238 - -
Arst8g01417 806 MobiDBLite consensus disorder prediction 763 788 - -
Arst8g01417 806 Hamap Protein SEY1 [SEY1]. 9 761 IPR008803 -
Arst8g01417 806 PANTHER PROTEIN SEY1 8 780 IPR008803 -
Arst8g01417 806 PANTHER PROTEIN SEY1 8 780 IPR008803 -
Arst8g01417 806 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Arst8g01417 806 MobiDBLite consensus disorder prediction 759 788 - -
Arst8g01417 806 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Arst8g01417 806 CDD GBP 36 242 - -
Arst8g01417 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 277 IPR027417 -
Arst8g01417 806 Pfam Sey1 three-helix bundle domain 323 759 IPR046758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01417 Arst-Chr8 23325117 23331987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01417 K22698 - gmx:100777656 1244.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01417 8 23325117 23331987 Arst9g00644 9 5706868 5715355 PCT