Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01254 ATGGCACCTTTGTTCAGCTGGGGTGCGAAAGAGAGCCACCGTGGAACACCGGTGGTGGTGAAGATGGAGAACCCAAACTGGTCCATGGTGGAGCTCGAGGGTCCTTCCGACGAAGACTTGATCATTGGTGGTGGTGGTGAACATTCGAGTCGCGCAGGGGAAAAAAGAAGAGGCAAAAACGCAAAGCAACTCACCTGGGTTCTTCTCCTTAAAGCACATAAAGCCGCCGGTTGTTTAGCCTCCGTAGCACCGGCATTGTACGTCCTGGCCTCCGCCGTGAAGCGCCGCGTGGCCTCCGGAAGAACAGACGAGGACGCAGACTCCGGCGGCAGGGAGAACGAGAACCCAACGGTGAAGAGCAGATTCTACTCTTTCATCAAGGTTTTTCTGTGGCTTTCGGTGGCACTCTTGTGTTTTGAAATTGCTGCGTATTTGAAAGGGTGGCATTTGGGTTCTCCAAGTCTTCAGTTGGAATTTTATTTGCTTTGGTCACCTTCTTTTGGAGTGAAGGATTTCTTCGATTGGCTTTATTCTCGGTGGGTTTTGGTTCGTGTGGAGTACCTTGCTCCACCTCTTCAGTTTCTCGCCAATGTGTGTATTATTCTCTTTATCATTCAGAGTTTCGATAGGCTTCTTCTCTGCTTGGGTTGTTTCTGGATCCGATTTAAGAAGATCAAACCCATCCCCAAAGATGCACCTCTGGATCTTGAATCTGGAGAGAAAGGTTACTTCCCCATGGTGCTTGTTCAGATCCCCATGTGCAATGAGAAAGAGGTTTACCAGCAATCTATTGCGGCCGTGTGCAATTTGGATTGGCCAAAGTCCAAGTTGTTGATTCAGGTGCTTGATGATTCTGATGACCCAACAACGCAGTTGCTGATCAAGGAGGAGGTGCAAAAATGGCAACATGAGGGTGCCAACATTTTCTACCGCCATCGCGTCATTAGGGATGGTTACAAGGCTGGGAACCTGAAATCCGCCATGAATTGTAGCTATGTCAAGGACTATGAGTTCGTTGCAATCTTTGATGCTGACTTTCAACCCACACCAGATTTCCTTAAGAGAACAGTTCCTCATTTTAAGGATAATGAGGAACTAGCACTTGTTCAAGCAAGATGGTCTTTTGTGAATAAGGATGAGAACCTGTTAACCAGGTTGCAGAACATTAACCTATCATTCCATTTCGAGGTGGAGCAACAAGTCAATGGCATTTTCATTAATTTCTTTGGCTTCAATGGCACTGCTGGGGTGTGGAGAATCAAGGCCTTGAATGATGCTGGTGGTTGGTTGGAGAGAACCACTGTTGAGGACATGGACATTGCTGTTAGAGCTTATCTCCATGGCTGGAAATTTATCTTCCTCAATGATGTTGAGTGCCAGTGCGAGTTACCAGAATCTTATGAAGCTTATAGGAAACAACAACATAGATGGCATTCTGGGCCAATGCAATTGTTCCGCCTTTGTTTGCCTGACATCATACGGGCCAAGATAAGCATATGGAAGAAATTCAATATGATATTCCTATTCTTCCTTCTTAGAAAGCTTATATTGCCCTTCTATTCATTTACCCTTTTCTGCATAATTCTACCCATGACAATGTTCGTGCCCGAAGCTGAGCTTCCTTTTTGGGTTGTTTGCTACATACCTGCCACAATGTCATTCCTCAACATTCTTCCAGCTCCCCGAGCCTTCCCTTTCATTGTTCCCTATCTCCTATTTGAGAACACAATGTCTGTTACAAAATTCAATGCCATGATCTCCGGACTATTCCAGCTCGGCAGTGCTTACGAGTGGGTGGTCACCAAGAAATCGGGTCGTTCCTCTGAGGGTGATCTAGTCTCACTGATTGAAAAAGGACCAAAGCCTCAAAGAGGGTCCTCTGAACCTGATCTTGAGGAAATGAAAGAGGAAATGCGGAGGCAGGAGCAAAAAGCTGCCAAGAAGAAGAAGCACAACAGAATATATATGAAGGAGCTTGCATTGGCTTTCCTACTTCTAACAGCCGCAACAAGGAGTCTCCTTTCTGCACAGGGAATCCACTTCTACTTCTTGCTATTCCAGGGTATATCATTCCTTTTGGTTGGTTTAGACTTGATTGGTGAACAGGTAGACTAA 2115 0.4596 MAPLFSWGAKESHRGTPVVVKMENPNWSMVELEGPSDEDLIIGGGGEHSSRAGEKRRGKNAKQLTWVLLLKAHKAAGCLASVAPALYVLASAVKRRVASGRTDEDADSGGRENENPTVKSRFYSFIKVFLWLSVALLCFEIAAYLKGWHLGSPSLQLEFYLLWSPSFGVKDFFDWLYSRWVLVRVEYLAPPLQFLANVCIILFIIQSFDRLLLCLGCFWIRFKKIKPIPKDAPLDLESGEKGYFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKLLIQVLDDSDDPTTQLLIKEEVQKWQHEGANIFYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNEELALVQARWSFVNKDENLLTRLQNINLSFHFEVEQQVNGIFINFFGFNGTAGVWRIKALNDAGGWLERTTVEDMDIAVRAYLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISIWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPFWVVCYIPATMSFLNILPAPRAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLIEKGPKPQRGSSEPDLEEMKEEMRRQEQKAAKKKKHNRIYMKELALAFLLLTAATRSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01254 704 Pfam Glycosyl transferase family group 2 339 534 IPR001173 -
Arst8g01254 704 Coils Coil 631 651 - -
Arst8g01254 704 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 179 701 - -
Arst8g01254 704 MobiDBLite consensus disorder prediction 617 648 - -
Arst8g01254 704 FunFam probable xyloglucan glycosyltransferase 5 238 463 - -
Arst8g01254 704 MobiDBLite consensus disorder prediction 623 643 - -
Arst8g01254 704 SUPERFAMILY Nucleotide-diphospho-sugar transferases 247 545 IPR029044 -
Arst8g01254 704 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 237 462 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01254 Arst-Chr8 17080040 17083392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01254 1 704 Miscellaneous Gene Families AT4G07960 77.159 0.0 1070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01254 - - qsa:O6P43_015951 1195.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01254 8 17080040 17083392 Arst8g01254 8 17080040 17083392 ECH