Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01249 ATGATTCGAAGAGCTCTATGCTTCCCCAGTTTCATCAGGAAATCGCTGCTTATTCCACCCGTTATTTCTCCTTATTCTAATTCTTCCTCCAAGATCGGAGCTTACAATGGGTATGCATCTCAGACGTCTTCTCTTGAAGTTCCGGACTCAGCACCTTACAGGGAAAATGATGAGTATGCTGATGTGGACTGGGATAACCTTGGATTTGGACTAATGCCAACTGATTACATGTATGTAAACAAATGTGGTGCGGGGCAGCATTTTGGACATGGACAACTCAATCCTTATGGCAACATTCACCTTAGCCCATCAGCTGCTGTCTTAAATTATGGGCAGGGATTATTCGAAGGCACGAAAGCATACAGAAAAGAGAACGGGCAACTGCTTCTGTTCCGTCCAGAACAAAATGCCATTCGGATGAAGAGTGGCGCACAAAGAATGTGCATGGAAGCCCCTTCCGTTGACCAATTTGTCAACGCTTTGAAACAAACTGCTTTGGCTAATAAGCGCTGGGTTCCTCCTCCGGGGAAAGGATCGTTGTACCTTAGGCCTCTGCTTATAGGAAGCGGTGCGGTTTTGGGTTTGGCTCCAGCACCTGAATACACTTTCCTCATATATGCTTCCCCTGTTCGCAACTATTTCAAAGAGGGCTCTGCGCCACTCAACTTGTACGTAGAGGAGAATTTTGATCGTGCTTCTCGCCGCGGCACCGGCAGCGTTAAAACCATTTCTAATTATGCCCCTGTATTGATGGCGCAACTTAGAGCCAAGAAGAATGGATTTTCGGATGTGTTGTACCTGGACTCAGCCACCAAGAAGAATCTAGAGGAGGTTTCTTCTTGTAACATTTTTATTGCCAAGGGAAGATGCATCTCAACACCTGGTACTAATGGAACCATTCTTGCTGGAATCACGAGAAAAAGCGTAATTGAACTTGCCCGTGATCACGGCTATGAGGTAGAAGAGCGTGCTGTAGCTGTGGATGAATTAATGGAGGCTGATGAGGTTTTCTGCACAGGAACTGCTGTTGGTGTTGCTCCAGTCGGAGCCATCACATACCAAAATACAAGGATGGAATATAAAACGGGTTCTGGAACTATTTGTCAAGAGCTGTACAATACCCTTTTGGGAATTCAAACCGGCGTTATTGAAGATAAGAAGGGATGGATCATTGAAATTGACTGA 1185 0.4549 MIRRALCFPSFIRKSLLIPPVISPYSNSSSKIGAYNGYASQTSSLEVPDSAPYRENDEYADVDWDNLGFGLMPTDYMYVNKCGAGQHFGHGQLNPYGNIHLSPSAAVLNYGQGLFEGTKAYRKENGQLLLFRPEQNAIRMKSGAQRMCMEAPSVDQFVNALKQTALANKRWVPPPGKGSLYLRPLLIGSGAVLGLAPAPEYTFLIYASPVRNYFKEGSAPLNLYVEENFDRASRRGTGSVKTISNYAPVLMAQLRAKKNGFSDVLYLDSATKKNLEEVSSCNIFIAKGRCISTPGTNGTILAGITRKSVIELARDHGYEVEERAVAVDELMEADEVFCTGTAVGVAPVGAITYQNTRMEYKTGSGTICQELYNTLLGIQTGVIEDKKGWIIEID 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01249 394 Pfam Amino-transferase class IV 113 351 IPR001544 GO:0003824
Arst8g01249 394 CDD BCAT_beta_family 100 381 IPR033939 GO:0004084|GO:0009081
Arst8g01249 394 NCBIfam branched-chain-amino-acid transaminase 90 393 IPR005786 GO:0004084|GO:0009081
Arst8g01249 394 ProSitePatterns Aminotransferases class-IV signature. 277 306 IPR018300 GO:0003824
Arst8g01249 394 FunFam Branched-chain-amino-acid aminotransferase 222 393 - -
Arst8g01249 394 FunFam Branched-chain-amino-acid aminotransferase 43 220 - -
Arst8g01249 394 Gene3D - 37 221 IPR043131 -
Arst8g01249 394 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 54 390 IPR036038 GO:0003824
Arst8g01249 394 PANTHER AMINO ACID AMINOTRANSFERASE 44 393 IPR005786 GO:0004084|GO:0009081
Arst8g01249 394 PIRSF BCAT1 40 394 IPR005786 GO:0004084|GO:0009081
Arst8g01249 394 Gene3D - 222 393 IPR043132 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01249 Arst-Chr8 16977524 16982478 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01249 K00826 - gmx:100782644 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01249 8 16977524 16982478 Arst8g01249 8 16977524 16982478 ECH