Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01241 ATGGACAAATTTGAAAAAGAAAATAGAGGCAATGAAGCCATGATTCTGGGAAACCGCAACGAGATAGGGGATGAGATGCAGTCCAGTGATGGGACTTGCCCCTCTCTTGGTCAGATCATGGAGGGAAAACACTCTGTTCCAAGTATGACCAAGCCTACTAATATCATACAAAATCATGACTTCTCTGAAGGGCTAAGCTTTTGGCATCCGAATGGCTGTGACGGCTATGTTGCTTCAACTGAACCAGGTCCTCAAGGAGGAGTGACAATGACATTAGGTGCTAAATATGCTGTTATCACAAACAGAAAGGAATGGTGGCAAGGTCTTGAGCAAGATATCACTGGAAAAATCTCTGTCGCTTCCACTTATGCTGTTTCGGCCAATGTTGGAGTAGCTGCACTTTCTGAGGGATCTGCTGATGTTCTAGCTACCCTGAAACTAGAGTATCATGGTTCTGATGCAAGCTACCTGTTCCTTGGGAGAACTTCTTGTACAAATGGTAGCTGGGAAAATCTGAAAGGGACATTTTCATTGTCAACTATGCCTGATCGAGTTACATTTTATTTGGAAGGACCTGCTCCTGGAGTTGACCTTCTTATACAATCAGTAGAGATTACCTGCTCTAGTTCAAGTGATATTGAGGATCATGCAAAAACAACAGGAACTTTGTCAACTGAAGATGATAACATCATAATAAACCCACAATTTGATGATGGCCAGAATAACTGGTCTGGAAGAGGCTGCAAGATCGCAATACACGACTCACTGGGAAATGGAAAAGTCCTTCCCAAGGTTGGAAAATTCTTTGCAGCTGCAACAGAACGCACCCAAAGATGGGTTCAGAATCCGGATTCTCGAGAGCAGTATATAGGAATTGCCAATGTGCAGGCAACAAATCAAGATTGGGTTCAATTGCAGGGAAAGTTCCTCATAAATAATTCCCCATCAAAAGTGGTTGTTTATTTAGAAGGTCCCCCAGCAGGCATTGACATTCTTGTCAATACTATTGTTATAAAACATGCTCCCAAGACACCTCCATCAACGCCACCAGATTTTGAGGATGCTCCTTTTGGGATTAATATAATTGAGAATAGTAATCTGGCTAATGGCACCAATGGATGGTTTCCCCTTGGTAATTGTACTCTGAGTGTTGGAACCGGTTCGCCACGTGTGCTTCCACCAATGGCAAGAGACTCTCTTGGACCTCACGAATCATTGAGCGGCCGCTATGTCCTTGTAACGAACCGCACCCAAACATGGATGGGGCCTGCGCAGATGATCACTGAGAAATTGAAGCTGTTCTTAACATACCAAGTGTCTGCTTGGGTGAGGATTGGTTCAACAGGATCAGTTGGTCCTCAGAATGTGAATGTTGCCCTTAGTGTTGACGATCAGTGGGTGAATGGCGGACAGGTTGAGGTTGCTGATGACAGATGGCATGAAATTGGTGGATCATTTAGAATTGAGAAGCAACCATCAAAGGTTATGGTTTATATTCAAGGTCCTGCTTCTGGTGTTGATTTGATGATTGCTGGACTTCAAATCTTCCCTGTTGATAGACAAGCAAGGTTTAGATATTTAAGGAGGCAGACAGACAAGGTTCGAAAGCGCGATGTAATCTTGAAATTCTCTGGGCTGGAGGACATAAGTGGTCTAGGAACTTTGGTTAAAGTGAGGCAAATACAGAACGATTTTCCAATTGGAACATGCATCAACAGAACAAACATTGACAATGAAGACTTTGTTGACTTCTTTGTGAAGCATTTTAACTGGGCTGTGTTTGGGAATGAGTTGAAGTGGTATTGGACAGAACCACAACAGGGGAATATCAACTACAAAGATGCTGATGAAATGTTAGACTTATGCCTCAAGAACAAGATAGAAACCCGCAGCCACTGCATCTTCTGGGAAGTAGAAGGCACAGTTCAGCAGTGGATCAAATCACTGAACAAAGACGATTTGATGAAAGCGGTCCAAAATCGGTTAAGCAGCCTCTTGAATCGGTACAAGGGGAAGTTCAGGCACTATGATGTTAACAATGAAATGCTGCATGGTTCATTTTATCAAGACAGGCTTGGTAGAGACATAAGAGCAAACATGTTCAAGACAGCACACCAATTAGACCCATCTGCTACTCTCTTTGTGAATGATTATCACATTGAAGATGGAAACGACACAAGATCAACACCAGAGAAATACATTCAACAGATTCTTGATTTGCAACATCAAGGTGCACCAGTTGGTGGAATTGGAATTCAAGGACACATAGATAGTCCTGTGGGGCCTATTGTTTGTTCTGCACTTGATAAATTAGGGACTCTTGGTTTACCAATATGGTTCACTGAGCTTGATGTTTCTTCAAGAAATGAGTATGTTAGAGCTGATGATTTGGAAGTTATGATGAGGGAAGCCATGGCACACCCTTCAGTAGATGGCATAATGCTGTGGGGATTCTGGGAATTGTTTATGAGCAGGGAGAATTCACACTTGGTGAATGCAGAAGGTGATGTTAATGAAGCTGGAAAAAGGTTACTTTGTCTTAAACAAGAGTGGTTGTCTCATAGCCATGGCTGTGTTGATGATCAAGGACTATTCAGCTTCAGAGGCTTCAGTGGAACATACAATGTTGAAGTTGTAACCTTATCTAAGATTGTTTCAAAGACATTTGTTGTTGGTAAAGGTGACTCTCCTTTGGAGGTAGAGGTATCCTTTGACTAG 2718 0.4253 MDKFEKENRGNEAMILGNRNEIGDEMQSSDGTCPSLGQIMEGKHSVPSMTKPTNIIQNHDFSEGLSFWHPNGCDGYVASTEPGPQGGVTMTLGAKYAVITNRKEWWQGLEQDITGKISVASTYAVSANVGVAALSEGSADVLATLKLEYHGSDASYLFLGRTSCTNGSWENLKGTFSLSTMPDRVTFYLEGPAPGVDLLIQSVEITCSSSSDIEDHAKTTGTLSTEDDNIIINPQFDDGQNNWSGRGCKIAIHDSLGNGKVLPKVGKFFAAATERTQRWVQNPDSREQYIGIANVQATNQDWVQLQGKFLINNSPSKVVVYLEGPPAGIDILVNTIVIKHAPKTPPSTPPDFEDAPFGINIIENSNLANGTNGWFPLGNCTLSVGTGSPRVLPPMARDSLGPHESLSGRYVLVTNRTQTWMGPAQMITEKLKLFLTYQVSAWVRIGSTGSVGPQNVNVALSVDDQWVNGGQVEVADDRWHEIGGSFRIEKQPSKVMVYIQGPASGVDLMIAGLQIFPVDRQARFRYLRRQTDKVRKRDVILKFSGLEDISGLGTLVKVRQIQNDFPIGTCINRTNIDNEDFVDFFVKHFNWAVFGNELKWYWTEPQQGNINYKDADEMLDLCLKNKIETRSHCIFWEVEGTVQQWIKSLNKDDLMKAVQNRLSSLLNRYKGKFRHYDVNNEMLHGSFYQDRLGRDIRANMFKTAHQLDPSATLFVNDYHIEDGNDTRSTPEKYIQQILDLQHQGAPVGGIGIQGHIDSPVGPIVCSALDKLGTLGLPIWFTELDVSSRNEYVRADDLEVMMREAMAHPSVDGIMLWGFWELFMSRENSHLVNAEGDVNEAGKRLLCLKQEWLSHSHGCVDDQGLFSFRGFSGTYNVEVVTLSKIVSKTFVVGKGDSPLEVEVSFD 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01241 905 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 775 785 IPR031158 -
Arst8g01241 905 FunFam Endo-1,4-beta-xylanase A 553 855 - -
Arst8g01241 905 SUPERFAMILY Galactose-binding domain-like 52 208 IPR008979 -
Arst8g01241 905 Gene3D Glycosidases 552 855 - -
Arst8g01241 905 Pfam Glycosyl hydrolase family 10 561 818 IPR001000 GO:0004553|GO:0005975
Arst8g01241 905 SUPERFAMILY (Trans)glycosidases 556 855 IPR017853 -
Arst8g01241 905 SUPERFAMILY Galactose-binding domain-like 358 519 IPR008979 -
Arst8g01241 905 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 552 847 IPR001000 GO:0004553|GO:0005975
Arst8g01241 905 PANTHER GLYCOSYL HYDROLASE 353 896 IPR044846 GO:0004553|GO:0005975
Arst8g01241 905 Coils Coil 830 850 - -
Arst8g01241 905 Gene3D - 48 207 - -
Arst8g01241 905 Gene3D - 357 516 - -
Arst8g01241 905 Gene3D - 275 340 - -
Arst8g01241 905 Pfam Carbohydrate binding domain 360 504 IPR003305 GO:0016798
Arst8g01241 905 Pfam Carbohydrate binding domain 54 194 IPR003305 GO:0016798
Arst8g01241 905 SMART glyco_10 598 848 IPR001000 GO:0004553|GO:0005975
Arst8g01241 905 SUPERFAMILY Galactose-binding domain-like 227 343 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01241 Arst-Chr8 16851983 16862599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01241 53 904 Glycoside Hydrolase AT1G58370 63.687 0.0 1188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01241 - - pcin:129303045 1385.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01241 8 16851983 16862599 Arst8g01241 8 16851983 16862599 ECH