Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01230 ATGGGCCGTTCTCTCCTCTTTCTGCTCGCGGCCTTCTTCGCCGTCCTTGTCTCCGCCGTTCGAGACCCCATCGGAGAAGTTATCCGCCTTCCTTCCGAAGCTTCCAGATTCTTCAAAGCGCCTTCCGACGACGACGACAACGTGGAGGAAGGAACTCGCTGGGCCATTTTAATCGCTGGTTCCAATGGCTACTGGAATTACAGACATCAGGCTGATGTTTGTCATGCGTATCAATTACTGAGGAAAGGTGGTCTCAAAGAAGAAAACATCATTGTGTTTATGTATGATGACATTGCTTTCAATGAAGAGAACCCACGGCCCGGAGTCATCATTAACAGTCCACATGGAGATGATGTTTACAAAGGAGTCCCAAAGGATTATGTTGGTGGAGATGTTACTGTAAACAACTTTTTTGCTGCTATACTTGGAAATAAGTCAGCTCTTACAGGTGGCAGTGGGAAGGTTGTAGATAGTGGTCCCAATGATCATATATTTATATACTATAGTGATCATGGGGGTCCTGGGGTGCTTGGGATGCCTACTAGTCCTTACTTATATGCATCTGATCTGATCGAAGTCTTGAAGAAGAAGCATGCTTCTGGAACATATAAAAGCATGGTATTTTATCTTGAGGCATGTGAATCTGGAAGTATCTTTGAAGGCCTTCTTCCAGAAGGTCTGAATATCTATGCAACAACAGCCGCAAACGCAGAAGAAAGCAGTTGGGGAACATATTGCCCTGGGGAGAATCCTAGTCCTCCACCAGAATTTGGAACCTGTCTAGGTGACCTATACAGTGTTGCTTGGATGGAAGACAGTGCCATACACAATTTACGTACAGAAACTTTGCACCAACAATACCAATTGGTTAAAGAAAGGACTTCCAACGGAAATTCAATGTATGGCTCTCATGTGATGCAATATGGTGATATAGGGATTAGCAGTAATAATCTCTTCCTATATTTGGGCACAAATCCAGCTAATGAAAATTTTACGGTTATGGATAACAACTCCTTGAAGCTACCGTCAAAGACAGCAGTAAACCAACGTGATGCAGATCTTGTCCATTTCTGGGATAAGTACCTCAAAGCTCCTGAGGGTTCTCCAAGGAAAGCTGCAGCAGAGAAACAAGTTATGGAAGCAATGTCTCACAGAATGCATATAGATAGCAGCGTCAAACTTATTGGAAAGCTCTTATTCGGCATTGAAAAAGGTCAAGAAATACTTAGCAGTGTTAGACCTTCTGGGGAGCCACTTGTTGATGACTGGGACTGCCTGAAATCACTGGTTACGACTTTTGAGACGCATTGCGGATCGTTGTCTCAGTATGGAATGAAACACATGAGATCCTTTGCAAACTTCTGCAATGCAGGCATAAGGAGGGAGCAATTGGCTGATGCCTCAGCACATGCATGCACAAGTGTTCCATCCAATCCATGGAGTTCACTACACAGGGGTTTCAGTGCATAG 1470 0.4422 MGRSLLFLLAAFFAVLVSAVRDPIGEVIRLPSEASRFFKAPSDDDDNVEEGTRWAILIAGSNGYWNYRHQADVCHAYQLLRKGGLKEENIIVFMYDDIAFNEENPRPGVIINSPHGDDVYKGVPKDYVGGDVTVNNFFAAILGNKSALTGGSGKVVDSGPNDHIFIYYSDHGGPGVLGMPTSPYLYASDLIEVLKKKHASGTYKSMVFYLEACESGSIFEGLLPEGLNIYATTAANAEESSWGTYCPGENPSPPPEFGTCLGDLYSVAWMEDSAIHNLRTETLHQQYQLVKERTSNGNSMYGSHVMQYGDIGISSNNLFLYLGTNPANENFTVMDNNSLKLPSKTAVNQRDADLVHFWDKYLKAPEGSPRKAAAEKQVMEAMSHRMHIDSSVKLIGKLLFGIEKGQEILSSVRPSGEPLVDDWDCLKSLVTTFETHCGSLSQYGMKHMRSFANFCNAGIRREQLADASAHACTSVPSNPWSSLHRGFSA 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01230 489 CDD legumain_C 351 472 - -
Arst8g01230 489 PANTHER HEMOGLOBINASE FAMILY MEMBER 34 474 IPR001096 GO:0006508|GO:0008233
Arst8g01230 489 Gene3D - 51 347 - -
Arst8g01230 489 FunFam Vacuolar-processing enzyme beta-isozyme 51 347 - -
Arst8g01230 489 FunFam Vacuolar-processing enzyme beta-isozyme 349 477 - -
Arst8g01230 489 Gene3D - 349 478 IPR046427 -
Arst8g01230 489 PRINTS Hemoglobinase (C13) cysteine protease signature 79 108 IPR001096 GO:0006508|GO:0008233
Arst8g01230 489 PRINTS Hemoglobinase (C13) cysteine protease signature 54 78 IPR001096 GO:0006508|GO:0008233
Arst8g01230 489 PRINTS Hemoglobinase (C13) cysteine protease signature 203 219 IPR001096 GO:0006508|GO:0008233
Arst8g01230 489 PRINTS Hemoglobinase (C13) cysteine protease signature 126 141 IPR001096 GO:0006508|GO:0008233
Arst8g01230 489 PRINTS Hemoglobinase (C13) cysteine protease signature 154 173 IPR001096 GO:0006508|GO:0008233
Arst8g01230 489 Pfam Peptidase C13 family 53 323 IPR001096 GO:0006508|GO:0008233
Arst8g01230 489 PIRSF Legumain 1 489 IPR001096 GO:0006508|GO:0008233
Arst8g01230 489 PIRSF AE 1 489 IPR043577 GO:0004197|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01230 Arst-Chr8 16725783 16730368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01230 K01369 - gmx:100791675 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01230 8 16725783 16730368 Arst8g01230 8 16725783 16730368 ECH