Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01174 ATGGATTTCAGGTTGATGGGACTCGATTCTCCATTGCTGAGCACCATTCACCACATGATGGATATGAGCGACGACAATGCCGACGCCAAGAACATCAACGCTCCCACAAGGACCTACGTGCGTGACGCGAAGGCGATGGCGGCTACTCCGGCCGACGTGAAGGAGTATCCTCAGTCGTACGTGTTCGTGATCGACATGCCGGGACTGAAGTCCGGTGACATCAAGGTTCAGGTGGAGGACGACAACGTTCTGATCATCAGCGGCGAGAGGAAGAGGGATGAAGAGAAAGAAGGTGCTAAGTATTTGAGGATGGAGAGGAGGGTTGGAAAATTCATGCGCAAGTTTGTGTTACCGGAGAATGCAAACACTGATGCTATCTCTGCTGTGTGTCAAGACGGAGTTCTCACCGTCACCGTTCAGAAGCTTCCTCCTCCTGAGCCTAAGAAGCCTAAGACTATTGAGGTTAAGATTGCTTGA 477 0.5136 MDFRLMGLDSPLLSTIHHMMDMSDDNADAKNINAPTRTYVRDAKAMAATPADVKEYPQSYVFVIDMPGLKSGDIKVQVEDDNVLIISGERKRDEEKEGAKYLRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKIA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01174 158 Pfam Hsp20/alpha crystallin family 52 156 IPR002068 -
Arst8g01174 158 SUPERFAMILY HSP20-like chaperones 28 150 IPR008978 -
Arst8g01174 158 Gene3D - 9 157 IPR008978 -
Arst8g01174 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 158 IPR002068 -
Arst8g01174 158 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 12 156 IPR031107 -
Arst8g01174 158 FunFam 17.3 kDa class II heat shock protein-like 11 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01174 Arst-Chr8 16261273 16262082 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01174 K13993 - csav:115717090 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01174 8 16261273 16262082 Arst8g01174 8 16261273 16262082 ECH