Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01167 ATGGGTGGCACTGGCACCGTTGTTTCTCAGTTCCTCAATCTATCATCATCTTCTTCTTCTTATTCTCCACGCTTCCTTGCTCCTTCACTGTCGTGTGCTGCTTCAACCCTCCTTCATTCTCGCTTCTCACTCCCTTCTATCCGCTCTTGCACTTCCTCTGCCACCGCCACACCTTCTACTTCTTCAGACACGATCACTCCTCCAACCCCTCTCAAGAAACGGGTAGTCTCGGGAGTGCAGCCAACTGGGTCAATTCACCTTGGAAACTATTTTGGAGCCATCAAGAATTGGGTTGCACTTCAGAATACATATGATACACTTTTCTTCATTGTAGACCTCCACGCGATTACATTACCTTATGAAGCACAACAATTATCTAAGGCTTCAAGGTCAACTGCAGCTATTTATCTGGCATGTGGAGTGGATCCTTCTAAGGCTTCTGTTTTTGTACAGTCTCATGTTCGGGCACATGTAGAATTAATGTGGTTGCTAAGTTCTGCAACACCAATTGGTTGGCTGAACAAAATGATACAGTTCAAAGAGAAATCTCGCAAGGCGGGTGATGAAGAAGTTGGAGTTGCCCTTTTGACTTATCCTGTTCTGATGGCTTCTGATATACTTCTATATCAGTCTGATTTTGTCCCTGTTGGTGAAGATCAAAAGCAGCACTTGGAGTTGACTCGTGACTTAGCAGAACGGGTTAATTACTTATATGGAGGAAGAAAGTGGAAAAAATTAGGAGGGTAGGGAACTATTTTAAAATTGGATATAAGAACCATCTATACAAAGGTTCCGGAGCCTCTTATACCTCCAGCTGGAGCCCGAATTATGTCCCTAACGGATGGCCTTTCTAAGATGTCAAAGTCCACACCTTCTGATCAATCGAGAATCAATTTGCTTGATCCTAAAGATCTTATAGCAAACAAGATCAAACGTTGCAAAACTGATGCATTTCCAGGATTGGAGTTTGATAATCCTGAGAGGCCAGAATGTAACAATCTTCTTTCCATATACCAGCTCATTTCGGGAAAGACAAAAGAGGAAGTTGTTCAGGAGTGCCAAAACATGAACTGGGGCGCCTTCAAAACTCTCTTAACAGATGCCTTGATTGATCATTTGCGTCCAATTCAGGTTCGCTATGACGAAATCATGTCCGATTCTGGTTACTTAGATGATGTTTTAGCAGAAGGTGCTAGAAATGCATCAGAAATAGCAGATGCCACTGTCAATAATGTTTACCAAGCAATGGGATTTTTGGGGAGAAGGTGA 1269 0.4287 MGGTGTVVSQFLNLSSSSSSYSPRFLAPSLSCAASTLLHSRFSLPSIRSCTSSATATPSTSSDTITPPTPLKKRVVSGVQPTGSIHLGNYFGAIKNWVALQNTYDTLFFIVDLHAITLPYEAQQLSKASRSTAAIYLACGVDPSKASVFVQSHVRAHVELMWLLSSATPIGWLNKMIQFKEKSRKAGDEEVGVALLTYPVLMASDILLYQSDFVPVGEDQKQHLELTRDLAERVNYLYGGRKWKKLGGXGTILKLDIRTIYTKVPEPLIPPAGARIMSLTDGLSKMSKSTPSDQSRINLLDPKDLIANKIKRCKTDAFPGLEFDNPERPECNNLLSIYQLISGKTKEEVVQECQNMNWGAFKTLLTDALIDHLRPIQVRYDEIMSDSGYLDDVLAEGARNASEIADATVNNVYQAMGFLGRR 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01167 422 FunFam Tryptophan--tRNA ligase 276 386 - -
Arst8g01167 422 Pfam tRNA synthetases class I (W and Y) 74 373 IPR002305 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Arst8g01167 422 CDD TrpRS_core 74 370 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Arst8g01167 422 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 81 90 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Arst8g01167 422 PANTHER TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL 46 419 - -
Arst8g01167 422 PRINTS Tryptophanyl-tRNA synthetase signature 285 295 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Arst8g01167 422 PRINTS Tryptophanyl-tRNA synthetase signature 212 233 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Arst8g01167 422 PRINTS Tryptophanyl-tRNA synthetase signature 135 154 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Arst8g01167 422 PRINTS Tryptophanyl-tRNA synthetase signature 85 101 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Arst8g01167 422 NCBIfam tryptophan--tRNA ligase 72 418 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Arst8g01167 422 Gene3D - 278 388 - -
Arst8g01167 422 Gene3D HUPs 75 417 IPR014729 -
Arst8g01167 422 Hamap Tryptophan--tRNA ligase [trpS]. 72 419 IPR024109 GO:0004830
Arst8g01167 422 SUPERFAMILY Nucleotidylyl transferase 73 418 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01167 K01867 - gmx:100780447 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01167 8 16149203 16154679 Arst8g01167 8 16149203 16154679 ECH