Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01160 ATGGTGGTTTCCGATGCTCCCAACGGCGGTGGCTCTTCGTCTCCGCCACTGGTGGTGGAGCAAACCAACACGCTTGGGATCACGAAGCCTATCTCTCTCGCCGGTCCCACCGACGCCGATTTACATCGGAACGCCGAATTGGAGAAGTTTCTGCTTGATTCGGGACTCTACGAGAGCAATGAAGAAGCTGCTACCAGGAGAGAGGTTCTTCAGCGCCTTGATCAGACTGTTAAAAGTTGGGTGAAGCAGTTAACGCGTCAACGAGGCTATACGGATCAGATGGTTGAGGATGCCAATGCCGTTATTTTCACTTTCGGTTCTTATCGACTAGGGGTACATGGACCAGGAGCTGACATAGACACTTTGTGTGTTGGCCCTTCTTATGTGAATCGGGAGGAAGACTTCTTTATCATTCTGCATAACATCTTGGCTGAAATGGAAGAAGTTACTGAACTTCAACCAGTTCCAGATGCTCATGTCCCCGTAATGAAATTCAAGTTCCAGGGAATATCTATAGATTTGCTTTATGCAAGTATATCTCTTTTGGTTGTGCCTGAAGACCTGGACATCTCACATGGCTCAGTGCTGTATGATGTTGATGAACCTACTGTTCGAAGTCTTAATGGCTGCCGGGTGGCAGATCAAATTCTTAAACTTGTTCCAAATGTTGAGCACTTCCGAACCACACTGAGATGTTTAAAGTTTTGGGCTAAAAGGCGTGGTGTTTATTCAAATGTTACGGGATTCCTTGGAGGCGTGAATTGGGCTCTATTAGTTGCTCGAATTTGCCAGCTTTACCCTAATGCAATCCCTAGTATGCTGGTTTCTCGATTCTTTAGGGTATATACACAGTGGAGGTGGCCAAATCCTGTCATGCTGTGCACAATAGAGGAAAATGAACTGGGTTTCCCAGTTTGGGATCCTCGTAGAAACCCGCGGGACAGATATCACATTATGCCAATTATTACTCCTGCATACCCTTGCATGAATTCCAGCTACAATGTCTCTGCAAGCACTCTTCGTGTTATGAAGGAACAGTTTCGCTATGGCAACAAGATTTGTGATGAAATTGAGCTCAGTAAAGCCCAATGGAGTGCACTTTTTCAGCCATATTTCTTTTTCGAAGCCTACAAAAACTATTTACAAGTGGACATCCTTGCAGCAGACACTGATGACTTGTTAGCATGGAAAGGTTGGGTAGAATCTCGATTGAGGCAGCTCACCCTGAAGATAGAGCGGGATACAAATGGGATGTTGCAGTGTCATCCTTACCCACATGAGTATGCAGACACATCCAGACATTGTGCTCATTCTGCATTTTTCATGGGCTTGCAAAGAAAAGAGGGAGAAAAAGGTCAAGAGGGACAACAATTTGATATACGTGGAACGGTTGATGAATTCAGGCAAGAAATAAATATGTATATGTACTGGAAGCCAGGGATGGAAATTTTTGTTTCCCATGTACGTCGAAAGCAGCTCCCTTTATTTGTATTTCCAGATGGTTACAAACGCAATCGGATGTCAAGGCACATAAGCCATTCAGCTGAAAAAATGGGTGAGGATGCCGCAAAGTCCAACCTAGGGTCTTCTGAAAGAAGTGTCAAGAGGAAAAATGACCATGAAATGTTGGATGAGAAGCTAGGCAAACCAGAGAAGAGGGCCTCTATCAGCCCACAGAGGCTAGTGTGCGTCTCTCCAGAAAGTTGTTCATCTCAAATGAGTATTGATGGTACCAAAGGGGTTAGGTTAGCCAAGAATGCTGGCACCAAATGCGAAATTAAGTCATCTAATGGACTCCTAGAAAATGGAATAAGTACCGAAGGAGCTTACGTGCATCTTAGTGAAACAGGTGGTGTTCATCCCAAAAATGATAGTCAGAACTCAAGGTGTTCAGAAGTTCAGAATGAGAATGGAGTCGATAGGAACAAAGCTGGGGAAATGGATCTGGATTGCTTGGAAAGTGCAGAAACTGCATCTTCCAAAAGCTTGTCAAACTGTAAAGAGAGTGCTGTTGATATGGATCAACGACTAGACAATACTCATAATTTCCAAAGAACTGAATATTCAGATTATGTACCAACTGCGAGCTCCCAGGCCCTCAATTGCGAGGGTGATGATGATTGTGTGGCACATCCAGATCAGTTCTGA 2148 0.4446 MVVSDAPNGGGSSSPPLVVEQTNTLGITKPISLAGPTDADLHRNAELEKFLLDSGLYESNEEAATRREVLQRLDQTVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHNILAEMEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCTIEENELGFPVWDPRRNPRDRYHIMPIITPAYPCMNSSYNVSASTLRVMKEQFRYGNKICDEIELSKAQWSALFQPYFFFEAYKNYLQVDILAADTDDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSRHCAHSAFFMGLQRKEGEKGQEGQQFDIRGTVDEFRQEINMYMYWKPGMEIFVSHVRRKQLPLFVFPDGYKRNRMSRHISHSAEKMGEDAAKSNLGSSERSVKRKNDHEMLDEKLGKPEKRASISPQRLVCVSPESCSSQMSIDGTKGVRLAKNAGTKCEIKSSNGLLENGISTEGAYVHLSETGGVHPKNDSQNSRCSEVQNENGVDRNKAGEMDLDCLESAETASSKSLSNCKESAVDMDQRLDNTHNFQRTEYSDYVPTASSQALNCEGDDDCVAHPDQF 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01160 715 FunFam Nuclear poly(A) polymerase 4 372 488 - -
Arst8g01160 715 MobiDBLite consensus disorder prediction 619 637 - -
Arst8g01160 715 SUPERFAMILY Nucleotidyltransferase 22 219 IPR043519 -
Arst8g01160 715 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 373 498 IPR011068 GO:0003723|GO:0016779|GO:0031123
Arst8g01160 715 Gene3D - 26 368 - -
Arst8g01160 715 PANTHER POLY A POLYMERASE 15 540 - -
Arst8g01160 715 Pfam Poly(A) polymerase predicted RNA binding domain 373 433 IPR007010 GO:0003723|GO:0043631
Arst8g01160 715 Pfam Poly(A) polymerase predicted RNA binding domain 433 505 IPR007010 GO:0003723|GO:0043631
Arst8g01160 715 MobiDBLite consensus disorder prediction 530 553 - -
Arst8g01160 715 MobiDBLite consensus disorder prediction 514 554 - -
Arst8g01160 715 Pfam Nucleotidyltransferase domain 99 175 IPR002934 GO:0016779
Arst8g01160 715 Gene3D Poly(A) polymerase predicted RNA binding domain 373 488 - -
Arst8g01160 715 FunFam Poly(A) polymerase alpha, putative 58 214 - -
Arst8g01160 715 MobiDBLite consensus disorder prediction 615 637 - -
Arst8g01160 715 CDD NT_PAP_TUTase 66 220 - -
Arst8g01160 715 SUPERFAMILY PAP/OAS1 substrate-binding domain 221 370 - -
Arst8g01160 715 Gene3D Beta Polymerase, domain 2 58 214 IPR043519 -
Arst8g01160 715 FunFam Putative poly(A) polymerase gamma 200 368 - -
Arst8g01160 715 Pfam Poly(A) polymerase central domain 26 369 IPR007012 GO:0043631|GO:1990817
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01160 Arst-Chr8 16037472 16042447 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01160 K14376 - gmx:100819294 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01160 8 16037472 16042447 Arst8g01160 8 16037472 16042447 ECH