Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01131 ATGACATCGTCTAAGAGGCCAAATGCGGAGCCAAATGGGAAAGCGAAACGCCAAAAGTCAGGAACTGGTTTTTCGCCGTTGGATTTTGCTCCGGGGAGTGTTGTTTTCCGGTTGCTCTGCTCCGCGTCAAGGATTGGGAGTGTTATCGGCAAAGGTGGTGCCACCGTGACACAAATCCGACAGGAGACTGGTGTGAAGGTTAAGATTGAGGAAGCTGTACCTGGATGTGATGAGAGGGTTATTACTATTTTAGGTTCTGATAAGGAGACTGAGGAAGTCACTGACCAAGGAAGGGAGGTTAATAACAATAACAACAACAATAAAAATGATGATGATGAAGCTGAGAGCAAGGAGAAGGAGATTGGGGCAAAAGACGATGCACACAATGATGAAGATAAGGGGTCTGTTCCGGTTGAAGATTTGAAGAGTGAGAAGGGGAATTCTGCCATTCGGAAGGCTCTCTCGCTGGTTTTTGAGAAGATGGTTGAAGGAATGGAGGAGACAACAGAGGGGGATAAAGAAGGTAGTAAATCTTTGTCCTTTGTTTTTAGGCTACTTGTCCTTTCTAGTCAAGTTGGATGCCTTCTGGGGAAAGGTGGTAGCGTAATAAAGCAAATGTCAGCTGATAGTGGGGCACAGATTCGGATCCTTCCAAGGGACAAACTTCCACTGTGTGCGTCGGATTCTGATGAGCTTGTTCAGATCACAGGGGGAATCGACGTCGTCAGGAAAGCTCTTCAATCTGTTTCTCAACAACTTTTGGAAAATCCACCTCGGGATCATGAACCTCTTCGTGCCAATCCTACAGGACCATCTTCTCATTCAGCTGGTCAATTCCCACCACATAACCGTTCTCTTGCTGCACAAGGAGCGCCTTTTGCTGCAGGACCACGTGATATTTCTGTTTTTCATCCTGGTCCTCCTGTAATTCCCAAATTTCATGAAGGTGCCATACATGGACGCATGAGGCCTTCACAGGAGATGCTTACTTTCCGTTTATTGTGTCATGCTGAAAGAGTAGGAAATGTTATTGGTAAAGGTGGAGCAATCATAAAGGCTGTGCTGAACTATTGTTATGGAGCTCACCCAGATGATAGAGTATCTCCCGTGCAAGAGGCTGTATTTCGTGTGCAGAGCAGAATAGGAAGGTCTATACCTGATCCCAAAGAGCATAATATGTTAGCTAGGCTTCTTGTTTCTTCCAATCAAATAGGTTGTCTCCTTGGCAAGGGTGGTTCCATCATAACCGAAATGAGGAAGTTATCAGGGGCCCATATCCGTATATTAGGCAAGGATAAGGTTCCAAAGTGTGCTTCAGAAGATGAAGAAGTAATTCAGATAAGTGGAGAAGTCGAGGCAGTGCACGATGCACTTCTGCAAGTAACCACAAGACTAAGACATCATTTCTTTCGTGATGCATTTCCATCTATCAATTATCCTTCCAATTCTCCATTTCTAGATCAAGGTCCTCCATTCCCACCGTACTTTGGAAGGCGAGGACTTTCACCACCAGGGATGTATTCTAATCTAGGTCCACCTCCACACGGGGGTTTTCCTCTTGATGATGGTCCTCCTTTTATTAATAATATACGCAGACCAGGCATTCCTCCTCATTTATCCGAAAGAAAGCCTTGGGGTCCTCAGGGGTTACTAGAAGGTGGTGGACCCATGGGCTTACCAGACTTTCCAGGAGGCCCTCATAGGAGAATTCCAGGATTTGCAAGTGGGGGCCAACCAATTATCACTAGTACCACTGTTGAAGTAGTTGTTCCTCGAAAGCTTGTGCCTGTAATTTATGGGGAGGATGGTGAATGCCTAAAACAAATACTTGAGATCTCTGACGCAAATATCAAATTTATGGATCCAAAGCCTGGAGCTGTGGAAACCAAGATTATAATATCAGGAACCCCGGAGCAAACTCATGCTGCCCAAAGTCTTATTCAGGCGTTTGTCTTGAATGAGACAGAGTCTGGTTGA 1977 0.4542 MTSSKRPNAEPNGKAKRQKSGTGFSPLDFAPGSVVFRLLCSASRIGSVIGKGGATVTQIRQETGVKVKIEEAVPGCDERVITILGSDKETEEVTDQGREVNNNNNNNKNDDDEAESKEKEIGAKDDAHNDEDKGSVPVEDLKSEKGNSAIRKALSLVFEKMVEGMEETTEGDKEGSKSLSFVFRLLVLSSQVGCLLGKGGSVIKQMSADSGAQIRILPRDKLPLCASDSDELVQITGGIDVVRKALQSVSQQLLENPPRDHEPLRANPTGPSSHSAGQFPPHNRSLAAQGAPFAAGPRDISVFHPGPPVIPKFHEGAIHGRMRPSQEMLTFRLLCHAERVGNVIGKGGAIIKAVLNYCYGAHPDDRVSPVQEAVFRVQSRIGRSIPDPKEHNMLARLLVSSNQIGCLLGKGGSIITEMRKLSGAHIRILGKDKVPKCASEDEEVIQISGEVEAVHDALLQVTTRLRHHFFRDAFPSINYPSNSPFLDQGPPFPPYFGRRGLSPPGMYSNLGPPPHGGFPLDDGPPFINNIRRPGIPPHLSERKPWGPQGLLEGGGPMGLPDFPGGPHRRIPGFASGGQPIITSTTVEVVVPRKLVPVIYGEDGECLKQILEISDANIKFMDPKPGAVETKIIISGTPEQTHAAQSLIQAFVLNETESG 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01131 658 Gene3D K Homology domain, type 1 32 102 IPR036612 GO:0003723
Arst8g01131 658 Gene3D K Homology domain, type 1 178 258 IPR036612 GO:0003723
Arst8g01131 658 MobiDBLite consensus disorder prediction 252 289 - -
Arst8g01131 658 CDD KH-I_PEPPER_rpt2_like 394 466 - -
Arst8g01131 658 CDD KH-I_PEPPER_rpt1_like 34 93 - -
Arst8g01131 658 ProSiteProfiles Type-1 KH domain profile. 583 647 - -
Arst8g01131 658 MobiDBLite consensus disorder prediction 87 144 - -
Arst8g01131 658 ProSiteProfiles Type-1 KH domain profile. 33 100 - -
Arst8g01131 658 Coils Coil 100 120 - -
Arst8g01131 658 ProSiteProfiles Type-1 KH domain profile. 392 461 - -
Arst8g01131 658 Gene3D - 326 469 - -
Arst8g01131 658 MobiDBLite consensus disorder prediction 1 26 - -
Arst8g01131 658 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 174 258 IPR036612 GO:0003723
Arst8g01131 658 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 28 89 IPR036612 GO:0003723
Arst8g01131 658 ProSiteProfiles Type-1 KH domain profile. 180 249 - -
Arst8g01131 658 MobiDBLite consensus disorder prediction 268 282 - -
Arst8g01131 658 SMART kh_6 327 386 IPR004087 GO:0003676
Arst8g01131 658 SMART kh_6 582 652 IPR004087 GO:0003676
Arst8g01131 658 SMART kh_6 391 466 IPR004087 GO:0003676
Arst8g01131 658 SMART kh_6 32 102 IPR004087 GO:0003676
Arst8g01131 658 SMART kh_6 179 254 IPR004087 GO:0003676
Arst8g01131 658 Gene3D K Homology domain, type 1 582 655 IPR036612 GO:0003723
Arst8g01131 658 MobiDBLite consensus disorder prediction 105 144 - -
Arst8g01131 658 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 387 471 IPR036612 GO:0003723
Arst8g01131 658 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 583 653 IPR036612 GO:0003723
Arst8g01131 658 Pfam KH domain 585 648 IPR004088 GO:0003723
Arst8g01131 658 Pfam KH domain 36 93 IPR004088 GO:0003723
Arst8g01131 658 Pfam KH domain 396 461 IPR004088 GO:0003723
Arst8g01131 658 Pfam KH domain 183 249 IPR004088 GO:0003723
Arst8g01131 658 CDD KH-I_PEPPER_rpt2_like 182 253 - -
Arst8g01131 658 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 18 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01131 Arst-Chr8 15715772 15720962 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01131 K21444 - gmx:100777433 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01131 8 15715772 15720962 Arst8g01131 8 15715772 15720962 ECH