Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01110 ATGAACCCTCTTCTTGATAACGATCAAGTTCAACATAATCTTGAGAAATGGCCAAGTCCTAACGAGGCGTTTGCAGAAATGAAGGCCATATGGAAAATATCAGGCCCAACAGCCATAACGGGCTTGCTTATGTATTCAAGATCAATGATCTCGATGCTATTCCTCGGCTACCTCGGTGATGCCGAGTTAGCCGGGGGTTCCCTCTCCATTGGGTTCGCCAACATAACCGGCTACTCTGTCATCTCCGGTTTAGCCATCGGAATGGAACCGCTTTGTGGACAAGCTTACGGCGCCAAACAGTTGAAGATTCTGGGACTCACCCTTCAAAGAACCGTCCTCCTCTTACTGGCGGCCACCGTGCCCATCAGCGTGGCATGGCTCAACATGGAGAACATACTCTTATGGTGTGGACAAGACCACCAAATCTCGTCCACAGCTCAAATTTTCATCCTCTTTTCTATCCCTGATTTGTTCTTTCTTTCCCTCCTTCACCCTCTAAGAATCTATCTCAGAGCACAGAGCATTACGCTTCCGATAACGTTTTGCTCCGCCATCTCCGTTCTCCTCCACGTTCCGCTGAACTTCCTCCTTGTTGTCCATTTTAAGATGGGTGTTGCCGGGGTGGCCGTTGCAATGGTGTGCTTCAACTTCAATCTCTTCGTCTTCCTCTCCTCGTTCGTCTACTTCTCCGGCATCTATAAAGATTCCTGGGTTTCTCCGAGCATTGACTGCTTCAAAGGATGGTCATCGCTTCTTGCATTGGCTGTGCCGTCCTGCGTCTCCGTTTGCCTAGAGTGGTGGTGGTACGAATTTATGATAATGCTTTGTGGACTGTTGGTGAATCCAAAAGCAACCGTTGCATCAATGGGAATCTTAATCCAAACAACATCTTTGGTCTACGTGTTCCCATCGTCTCTTAGCCTTGGCGTCTCCACCAGGGTGGGAAATGAGTTGGGAGCCAATAGGCCCGCCAAGGCCCGCATTTGCATGATAGTTTCACTTTTTTGTGCAATGGGCTTGGGCATCACGGCGATGATCTTCACCACCTTGATGAGGCACCAATGGGGAAGGTTCTTCACCAATGACCAAGAAATTCTAAACCTTACGGCCATAGCATTGCCAATTGTCGGGCTTTGCGAGCTCGGCAACTGTCCACAAACTACAGGTTGCGGGGTTCTGCGGGGCTGTGCAAGGCCCACCATTGGAGCTAACATAAATTTGAGTTCGTTTTATTTGGTGGGTATGCCGGTCGCGGTAGTACTTGGATTTGTGAGTAAGATGGGATTTGTTGGGCTTTGGTTTGGGTTGCTTGCGGCCCAAGCAACATGTGCGGGCCTCATGTTGTTTGTTCTATGCAAGACTGATTGGAATGCTGAAGCACAAAAAGCAAAGGAACTAACCAATGCTGCTTCTTCTTCTGTTAATAATTCCAAAACGAAAGGAGAGGGTAACAAGAACATCAATGATCATCATCATAATCATCTCGAGAAGATTGTGATCGCCGTAGAGAATGATGAACTTGGCAAGATCACAGATCAATCATCATCACTTGAAACCGACCCACTGATCACACTTACTACCAATAATAAACAGTGTAAATTAATTAATTATTGTTGA 1617 0.4719 MNPLLDNDQVQHNLEKWPSPNEAFAEMKAIWKISGPTAITGLLMYSRSMISMLFLGYLGDAELAGGSLSIGFANITGYSVISGLAIGMEPLCGQAYGAKQLKILGLTLQRTVLLLLAATVPISVAWLNMENILLWCGQDHQISSTAQIFILFSIPDLFFLSLLHPLRIYLRAQSITLPITFCSAISVLLHVPLNFLLVVHFKMGVAGVAVAMVCFNFNLFVFLSSFVYFSGIYKDSWVSPSIDCFKGWSSLLALAVPSCVSVCLEWWWYEFMIMLCGLLVNPKATVASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANRPAKARICMIVSLFCAMGLGITAMIFTTLMRHQWGRFFTNDQEILNLTAIALPIVGLCELGNCPQTTGCGVLRGCARPTIGANINLSSFYLVGMPVAVVLGFVSKMGFVGLWFGLLAAQATCAGLMLFVLCKTDWNAEAQKAKELTNAASSSVNNSKTKGEGNKNINDHHHNHLEKIVIAVENDELGKITDQSSSLETDPLITLTTNNKQCKLINYC 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01110 538 Coils Coil 538 538 - -
Arst8g01110 538 CDD MATE_eukaryotic 26 462 IPR045069 GO:0042910|GO:1990961
Arst8g01110 538 MobiDBLite consensus disorder prediction 469 489 - -
Arst8g01110 538 Pfam MatE 36 196 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst8g01110 538 Pfam MatE 257 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst8g01110 538 PANTHER MULTIDRUG RESISTANCE PROTEIN 22 456 - -
Arst8g01110 538 NCBIfam MATE family efflux transporter 36 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01110 Arst-Chr8 15370310 15372602 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01110 K03327 - gmx:100788339 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01110 8 15370310 15372602 Arst8g01110 8 15370310 15372602 ECH