Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01018 ATGCAATATATGCATGCACACTTCTCTTTCTTCCTGCTGCCTTCAAATTCCAACCCGACCCAACCGAGTCAACACCACTCGGCCGAGTCACCACCGGTTCCAACAATCATGGGCCCCAAGTGCGCCACCTTAATCCTCTTTTTTACAATGTTTGTGGCAAGTAGCATTGCCATTGACCCATGCACCTCCAAGCCTGACGAAGCGGGCCTAACCGTGATACCCGTCTTCGGCAAATGCTCACCATTTGACCCACCCAAGCCCGACTCATGGGCCCAAACGGTCATAAACATGGCATCCAAAGACCCAGCCCGTCTCAAGTACTTGTCCACACTAGTAGGCCAAAAGTCCGTCGTTTCGGCCCCAATCGCTTCGGGCCAGGCCTTCAACATTGGAAACTACGTGGTCCGGGTCAAGATCGGAACCCCGGGCCAGCTCATGTTCATGGTCTTGGACACCAGCACTGACGAGGCCTTCGTCCCGTGCTCTGGTTGCGTGGGCTGCTCCGCCACCACATTCTCCCCCAAAGACTCCACAAGTTACGGCCCATTGGACTGCTCAGTCCCGCAATGTGGCCAGGTCCGTGGGCTTCAGTGTCCCTCCACGGGCGCAGGCGCGTGTGCTTTCAACCAATCCTACGCGGGCTCCACATTTTCCGCCACGCTCGTTCAAGATTCACTCAGATTAGCCAATGACGTAGTCCCGGGCTACTCATTCGGCTGCGTTAACGCAATCTCCGGGGAGTCCATTCCGGCCCAAGGGCTTCTGGGCCTGGGCCGTGGGCCTTTGTCTCTACTTTCGCAATCCGGCGCGCTCTACTCAGGTGTCTTCTCGTACTGCCTTCCCAGCTTCAAATCGTACTACTTCTCAGGGTCGCTCAAGCTTGGGCCCGTGGGGCAGCCCAAGAGTATCCGTACAACCCCACTTCTCCGAAACCCTCACAGGCCTTCCCTCTACTATGTGAACCTCACCGGAATAAGCGTGGGGAAGGTTCTCGTCCCTGTCCCCTCAGAGTACCTGGCTTTCGACCCGAACACCGGTTCCGGAACCATCATTGATTCCGGAACGGTGATAACCCGGTTCGTTGAGCCGGTGTACAATGTGGTGAGAGACGAGTTCAGGAAGCAGGTTGGTGGAACGTTCTCGAGCCTGGGAGCGTTTGACACGTGTTTCGTGAAGACGTACGAGAACTTGGCGCCAACGGTGACGCTTCACTTCACGGGGTTGGACCTGAAGCTTCCATTGGAGAACAGCTTGATACATAGTAGCGCTGGGTCGCTAGCTTGCCTTGCAATGGCGGCGGCTCCGAGTAATGTGAACTCTGTGCTGAACGTGATTGCCAACTTGCAGCAACAGAATCTTAGGATCTTGTTTGATACAATTAATAACAAGGTTGGGATAGCCCGTGAACTTTGTAACTAG 1419 0.5525 MQYMHAHFSFFLLPSNSNPTQPSQHHSAESPPVPTIMGPKCATLILFFTMFVASSIAIDPCTSKPDEAGLTVIPVFGKCSPFDPPKPDSWAQTVINMASKDPARLKYLSTLVGQKSVVSAPIASGQAFNIGNYVVRVKIGTPGQLMFMVLDTSTDEAFVPCSGCVGCSATTFSPKDSTSYGPLDCSVPQCGQVRGLQCPSTGAGACAFNQSYAGSTFSATLVQDSLRLANDVVPGYSFGCVNAISGESIPAQGLLGLGRGPLSLLSQSGALYSGVFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPHRPSLYYVNLTGISVGKVLVPVPSEYLAFDPNTGSGTIIDSGTVITRFVEPVYNVVRDEFRKQVGGTFSSLGAFDTCFVKTYENLAPTVTLHFTGLDLKLPLENSLIHSSAGSLACLAMAAAPSNVNSVLNVIANLQQQNLRILFDTINNKVGIARELCN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01018 472 Pfam Xylanase inhibitor C-terminal 318 467 IPR032799 -
Arst8g01018 472 Gene3D Acid Proteases 296 472 IPR021109 -
Arst8g01018 472 PANTHER ASPARTYL PROTEASES 50 465 IPR001461 GO:0004190|GO:0006508
Arst8g01018 472 SUPERFAMILY Acid proteases 126 471 IPR021109 -
Arst8g01018 472 FunFam Aspartyl protease AED3 296 472 - -
Arst8g01018 472 Gene3D Acid Proteases 110 295 IPR021109 -
Arst8g01018 472 FunFam aspartyl protease AED3 112 295 - -
Arst8g01018 472 Pfam Xylanase inhibitor N-terminal 133 295 IPR032861 -
Arst8g01018 472 ProSiteProfiles Peptidase family A1 domain profile. 133 467 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01018 Arst-Chr8 14005112 14006810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01018 116 472 Miscellaneous Gene Families AT1G77480 26.263 3.44e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01018 - - gmx:100816307 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01018 8 14005112 14006810 Arst8g01018 8 14005112 14006810 ECH