Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00997 ATGCTTTCATTGGTGCGGAAGGGAAGAAGCAGCATCATGATGTCATGCTCTCTATTCCTTACTTCTTTTAATTATTACTCACTCCCTCTTCTTTCTCATTCTCATTACAACACTCTCTCACGCGCCCCCACACTCTCACGCGCCCTGGCTTATCCGCAACCCTTTCCCGCAACCATGCTGCCTCCTGGATTTCGCGCTCTTTCTAACAACTTCTCAACAACCACTGAAGCTTCTGGAACCATGGACTCTTCTGTCTCAGTTACTTACCTCTCGCAGCGCCAAGCCGCCGAGATCGACGACACTCTCATGGGCCCTCTTGGCTTCTCTGTCGACCAGCTCATGGAATTGGCTGGTTTGAGCGTCGCTACTTCCATTGCTGAGGTTTACAAACCAGGCGAGTATAACCGTGTTCTTGTCATATGTGGTCCTGGTAACAATGGTGGCGATGGTTTGGTGGCCGCTCGTCACCTGCACCATTTTGGTTATAAGCCCTCGGTCTGCTACCCCAAGCGCACCCCGAAGCCTCTTTATGAAGGGTTAGTTACTCAGCTCGAAGCTCTGTCAATCCCTTTCTTGTCAGTGGAAGATCTACCTTCGGACTTGTCAAGTGACTTCAGCATTCTAATTGATGCGATGTTCGGATTCTCATTTCATGGTTCTCCAAGACCTCCTTTTGATGATTTGATCCAAAGATTTGTTACCTTACAAAATTATAATCAAAGTGGCCCGAAAAGATCAGTTATTGTCTCTGTAGATATTCCATCTGGGTGGCATGTCGAAGAAGGAGATATAAATGGTATAGGCCTTCAACCTGATATGTTGATTTCTTTGACAGCTCCGAAATTATGCGCAAAGAAGTTTAGTGGTCCTCACCACTTTCTAGGAGGTAGATTTGTCCCACCTGCTATTGCAGAAAAATATAAGCTTTTACTTCCACAATATCCTGGAACTTCCATGTGTGTCCGAATTGGAAAGCCGCCTAAAATTGATATTTCTGCTCTAAGAGAGAACTATATCTCTCCAGAGTTTCTTGAAGAGCAAGTGGAGGCAGACCCCATTAATCAGTTCCATAAATGGTTTGATGATGCATTAGCTGCTGGTCTGAAGGAACCAAATGCTATGGCATTGTCAACTGTAGGGAAGGATGGAAAACCCTCATCAAGAATGGTATTGCTAAAAGCTGTGGACAAGGATGGTTTTGTGTGGTACACAAACTATGAAAGTCATAAGGCACGTGATTTATCTGAAAATCCGCATGCTTCACTTCTTTTTTACTGGGATGGTCTAAACAGACAGGTAAGAGTGGAGGGGTCTGTTCAGAAAGTATCTGATGAGGAATCAGAGCAGTATTTCCATAGCCGTCCTAGAGGAAGTCAGCTTGGAGCAATAGTTAGTAAGCAGAGTTCTGTAGTGCCTGGAAGGCATGTTCTTCATCAGGAGTACAAAGAGCTTGAGCAAAAATTTTCTGATGGAAGTTTGATCCCTAAACCTAAGAATTGGGGAGGATACAGGCTAACACCAGAGCTTTTTGAATTTTGGCAAGGACAGCAATCTCGCTTGCATGACAGGTTACAATATTCTCCCCACGAGATCAATGGACAGAAAGTGTGGAAGGTTGAGCGGTTGGCCCCCTAA 1635 0.4502 MLSLVRKGRSSIMMSCSLFLTSFNYYSLPLLSHSHYNTLSRAPTLSRALAYPQPFPATMLPPGFRALSNNFSTTTEASGTMDSSVSVTYLSQRQAAEIDDTLMGPLGFSVDQLMELAGLSVATSIAEVYKPGEYNRVLVICGPGNNGGDGLVAARHLHHFGYKPSVCYPKRTPKPLYEGLVTQLEALSIPFLSVEDLPSDLSSDFSILIDAMFGFSFHGSPRPPFDDLIQRFVTLQNYNQSGPKRSVIVSVDIPSGWHVEEGDINGIGLQPDMLISLTAPKLCAKKFSGPHHFLGGRFVPPAIAEKYKLLLPQYPGTSMCVRIGKPPKIDISALRENYISPEFLEEQVEADPINQFHKWFDDALAAGLKEPNAMALSTVGKDGKPSSRMVLLKAVDKDGFVWYTNYESHKARDLSENPHASLLFYWDGLNRQVRVEGSVQKVSDEESEQYFHSRPRGSQLGAIVSKQSSVVPGRHVLHQEYKELEQKFSDGSLIPKPKNWGGYRLTPELFEFWQGQQSRLHDRLQYSPHEINGQKVWKVERLAP 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00997 544 NCBIfam NAD(P)H-hydrate epimerase 91 288 IPR004443 -
Arst8g00997 544 Hamap Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 337 544 IPR000659 GO:0004733|GO:0008615|GO:0010181
Arst8g00997 544 Pfam Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 500 544 IPR019576 -
Arst8g00997 544 SUPERFAMILY FMN-binding split barrel 345 544 - -
Arst8g00997 544 Gene3D - 86 328 IPR036652 -
Arst8g00997 544 Gene3D - 338 535 IPR012349 -
Arst8g00997 544 NCBIfam pyridoxamine 5'-phosphate oxidase 351 544 IPR000659 GO:0004733|GO:0008615|GO:0010181
Arst8g00997 544 Pfam Pyridoxamine 5'-phosphate oxidase 360 446 IPR011576 -
Arst8g00997 544 ProSitePatterns Pyridoxamine 5'-phosphate oxidase signature. 510 523 IPR019740 GO:0016638
Arst8g00997 544 PANTHER PYRIDOXINE-5-PHOSPHATE OXIDASE 330 544 IPR000659 GO:0004733|GO:0008615|GO:0010181
Arst8g00997 544 SUPERFAMILY YjeF N-terminal domain-like 88 318 IPR036652 -
Arst8g00997 544 ProSiteProfiles YjeF N-terminal domain profile. 95 311 IPR004443 -
Arst8g00997 544 FunFam NAD(P)H-hydrate epimerase 87 328 - -
Arst8g00997 544 FunFam NAD(P)H-hydrate epimerase 345 544 - -
Arst8g00997 544 Hamap NAD(P)H-hydrate epimerase [nnrE]. 91 326 IPR004443 -
Arst8g00997 544 Pfam YjeF-related protein N-terminus 111 283 IPR004443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00997 Arst-Chr8 13558628 13565372 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00997 K23998 - gmx:100795497 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00997 8 13558628 13565372 Arst8g00997 8 13558628 13565372 ECH