Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00987 ATGAAGAAACACGGCGAACACGAAGAACATGGCAACCTTACCGAAACCCTCCTCCTTCAACATAACGACCAAAAGATACAACATCAGCTCTGGATCGAGACCAAGAAGCTATGGCACATCGTGGGCCCCTCCATCTTCAGCCGCGTTGCCACCTTCACCATGAACGTCGTCACCCAAGCCTTCGCTGGACACCTCGGCGAACTCGAACTCGCCTCCATCTCCATCGCCAACACCGTCATTGTTGGCTTCAATTTTGGCCTCCTCTTGGGAATGGCGAGCGCGTTGGAGACACTGTGCGGGCAAGCGTTTGGGGCAAAAAAGTACGGCATGCTGGGGATATACATGCAGAGGTCATGGGTGGTTTTGTTTCTGTGCTGCTTCTTGCTCTTGCCATTTTACGTATTTGCCACTCCCATCTTGAAGCTTCTAGGGCAGCCTGATGACGTGGCGGAATGGAGTGGTATGGTGGCTGTGTGGCTCATCCCTCTTCACTTCAGCTTTGCATTCCAGTTCCCGCTGCAGAGGTTTCTTCAGTGCCAGCTCAAGACGGCGGTGATTGCGTGGGTTTCGTTGCTGGGCCTCGTGGTCAACGTGGTCACCAGCTGGCTCTTCATCTATGTGTGGGATTTTGGAGTTGTTGGTGCCGCCATTGCTCTGAATTTGTCCTGGTGGGTTCTTGTGATTGGGATGTTTGCTTATACTGCTTGCGGCGGTTGCCCATTGACTTGGACCGGTTTTTCCATGGAAGCGTTTTCTGGTCTATGGGACTTTCTCAAACTCTCTGCTGCTTCTGGTGTCATGCTATGCTTAGAAAACTGGTATTACAGAATATTGGTGCTAATGACTGGGCAGTTAGAGAATGTGACGGTTGCTGTTGATGCCTTGTCGGTATGTATGACTATCAATGGTTGGGAAATGATGATTCCCCTGGCCTTCTTCGCTGGTGTTGGAGTAAGGGTAGCAAATGAGCTAGGCGCAGGAAATGGGAAAGGAGCAAAATTTGCAACACAAGTGGCAGTGGCACAATCAATTGTGATTGGGGTTGTGTTCTGCGTGATAATAATGATTTTTCACGACCAATTCGCTTACTTATTCACCTCCAGTCCCCAAGTCCTTGATGCCGTTGACCACATGGCTTTCCTCTTAGCCATCACCATCCTCCTCAACAGTGTTCAACCCATTTTGTCAGGAGTGGCTGTTGGTTCGGGATGGCAAGCATATGTAGCATACATAAATATAGGGTGCTATTACGTTATTGGACTCCCTCTTGGAATAATCATGGGATGGATCTTCAAAACTGGCGTCGGAGGTATATGGGGAGGGATGATATTTGGAGGCACTGGAATCCAGACGCTCATACTCATCGTTGTAACGTCACGATGTGATTGGGAAAAGGAGGCTGAAGAAGCTAGTTCCCGGGTAAAGAAGTGGTCAAATTCTAAATCGAACGACCAAATAGAGGGCACCTCTGATCCCCATTAA 1482 0.4933 MKKHGEHEEHGNLTETLLLQHNDQKIQHQLWIETKKLWHIVGPSIFSRVATFTMNVVTQAFAGHLGELELASISIANTVIVGFNFGLLLGMASALETLCGQAFGAKKYGMLGIYMQRSWVVLFLCCFLLLPFYVFATPILKLLGQPDDVAEWSGMVAVWLIPLHFSFAFQFPLQRFLQCQLKTAVIAWVSLLGLVVNVVTSWLFIYVWDFGVVGAAIALNLSWWVLVIGMFAYTACGGCPLTWTGFSMEAFSGLWDFLKLSAASGVMLCLENWYYRILVLMTGQLENVTVAVDALSVCMTINGWEMMIPLAFFAGVGVRVANELGAGNGKGAKFATQVAVAQSIVIGVVFCVIIMIFHDQFAYLFTSSPQVLDAVDHMAFLLAITILLNSVQPILSGVAVGSGWQAYVAYINIGCYYVIGLPLGIIMGWIFKTGVGGIWGGMIFGGTGIQTLILIVVTSRCDWEKEAEEASSRVKKWSNSKSNDQIEGTSDPH 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00987 493 NCBIfam MATE family efflux transporter 43 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst8g00987 493 CDD MATE_eukaryotic 33 469 IPR045069 GO:0042910|GO:1990961
Arst8g00987 493 PANTHER MULTIDRUG RESISTANCE PROTEIN 27 463 - -
Arst8g00987 493 MobiDBLite consensus disorder prediction 476 493 - -
Arst8g00987 493 MobiDBLite consensus disorder prediction 471 493 - -
Arst8g00987 493 Pfam MatE 265 425 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst8g00987 493 Pfam MatE 43 203 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00987 Arst-Chr8 13452743 13457484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00987 K03327 - gmx:100500204 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00987 8 13452743 13457484 Arst8g00987 8 13452743 13457484 ECH