Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00974 ATGGTTTTCTCTAAAGCATTGGTTTTGGCACTCTTTCTAGCAATGAACATGGCCTTGCCAACCATTGCAACTGTTTACACTGTAGGAGATACCTCAGGTTGGGCCACTGGTGGTGATTATAGCACTTGGGCTAGTGGCAAGAACTTTATAGTTGGTGATAGCCTTGTTTTTAACTACGGATCCGGGCACACGGTGGACGAGGTGAAAGAAAGCGACTACAAATCATGCAGCACAGGGAATTCCATTAGCACAGATAGCAGTGGCGCCACCACCATACCTCTCAAGACTTCAGGCACACATTACTTCATTTGTAGTGTTCCTGGACACTGTTCTGGTGGAATGAAGCTTGCAGTTACTGTCAAGGATGGAAAATCATCATCATCCACTACTACTCCTTCTTCTTCTGGAAAGGGTTCACCACCTTCCTCAACAACAGCCACACCAAAATCCAATGCATCTTCTTCAGTGAGTAGGGTCACTCCAATTGTTGTGTTGATTGTTTCTTTGATCTCATGCTGTGTTTTGAATATGGTATGA 537 0.4451 MVFSKALVLALFLAMNMALPTIATVYTVGDTSGWATGGDYSTWASGKNFIVGDSLVFNYGSGHTVDEVKESDYKSCSTGNSISTDSSGATTIPLKTSGTHYFICSVPGHCSGGMKLAVTVKDGKSSSSTTTPSSSGKGSPPSSTTATPKSNASSSVSRVTPIVVLIVSLISCCVLNMV 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00974 178 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Arst8g00974 178 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Arst8g00974 178 Gene3D - 22 127 IPR008972 -
Arst8g00974 178 FunFam Blue copper 22 126 - -
Arst8g00974 178 CDD Phytocyanin 24 120 - -
Arst8g00974 178 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Arst8g00974 178 PANTHER BLUE COPPER PROTEIN 23 137 IPR039391 GO:0009055
Arst8g00974 178 MobiDBLite consensus disorder prediction 123 153 - -
Arst8g00974 178 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00974 Arst-Chr8 13279975 13281171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00974 31 126 Miscellaneous Gene Families AT1G22480 62.500 1.07e-35 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00974 - - gmx:100306522 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00974 8 13279975 13281171 Arst8g00974 8 13279975 13281171 ECH
Arst7g02419 7 59449334 59451373 Arst8g00974 8 13279975 13281171 PCT