Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00973 ATGCTTCACCAGCCTTTGCTCTGCGGCTCAAGAGCTGCCACCACCGCTCACTCCACACTCTTCGCTTCCTCACTTTCTGGCGGCATCAACGCCTCCCGCACTTCATTCGCCGGAAACTCCTTCTCCGGTCACTTCGGATTGAAATTGAACACGCAAGCTTCGGGAAGCAAATCAAATAGCACTGGTGGAGTTTTCAACGAGGGAAGGAACAGTGGCAAGCTTAGGACAAGTAATGCTCACGGTGCTCGTTCAACAGAGGGTGTAACTGAGGAAGAAGCCTTACAAGTGATTGAGAGCAGACCATCATGGAAAACCTTTCCAGGCCAGGCATTTCCATTGGGTGTATCAGAAGTTGACAATGGGATCAATTTTGCTATTTTTTCACAGCATGCAACTGCTGTCACACTTTGTTTAGTCCCTCCTGAGAGTGGAAGCATGGATGCACTGGATGGTGGCATGATAGAATTGGCTTTGGATCCTCATTTAAACAAAACAGGGGACGTTTGGCACATTTGCATTGAGGATCTGCCTCGGAGCAATGTTCTGTATGGATATCGCATAGATGGGCCTCAAGACTGGGGTAAGGGGCATCGATTTGACAGCAACATTGTGCTTGTTGATCCTTATGCAAAACTAATAGAAGGTCGGCGATATTTTGGGGACATTAGCATGAAGTTGTTTAAGTTTCTCGGCACATATGATTTTGACAGCTTACCTTTTGACTGGGGAGAAAATTGCAAGCTTCCAAATATTCCTGAGAAAGATCTTGTTATATATGAGATGAATGTCCGTGCATTTACAAGTGATGAATCTAGTGGGCTGGAAAATAACATTCGTGGTAGCTATCTTGGCGTGATTGAGAAGATCCCACACCTTCTAGAGCTTGGTATCAATGCAGTGGAGTTGCTACCTGTCTTTGAGTTTGACGAAATGGAGTTCCAAAGACGACCAAACCCCAGAGATCACATGATCAATACATGGGGTTATTCAACAATAAATTTCTTTTCCCCTATGAGTCGCTATGCTAGTGCTGGTGGAGGACCAGTTAATGCTTCCCGGGAATTCAAGTTAATGGTTAAAGCTTTACATTCTGCTGGCATAGAGGTTATTTTGGATGTTGTCTATAATCATACTAATGAGGCAGATGATCCTAATCCTTACACTACTTCATTTCGTGGTATAGATAATAAGGTTTACTACATGTTGGACAATGATGGTCAACTACTGAACTACTCTGGCTGTGGAAATACATTGAATTGTAACCATCCTGTGGTCATGGAGCTCATCCTTGACAGCCTAAGACACTGGGTCACTGAATATCATGTGGATGGATTTCGATTTGATCTTGCAAGTGTCCTTTGTCGAGGAACTGATGGTTCCCCCCTTAACGCTCCCCCTCTGATTAGGGCAATTGCTAAAGATGCAGTCTTATCGAGATGTAAAATTATTGCAGAGCCTTGGGACTGTGGAGGTCTTTATCTTGTTGGAAGTTTCCCAAATTGGGATCGATGGGCTGAATGGAATGGGAAATACCGTGATGATTTGCGGAAATTTTTCAAGGGTGATGCTGGTATGAAGGGGAGTTTTGCAACTCGGGTTGCTGGATCTTCTGATCTTTATAAAGTGAACAACCGTAGACCATATCATAGTATTAACTTTGTTATTGCACACGATGGGTTTACCTTGTATGATCTTGTGTCATACAATTGCAAGCACAATGAAGCCAATGGCGAAGGTGGAATGGATGGAAGCAATGACAATTTTAGTTGGAACTGTGGTTTTGAAGGGGAAACTGATGATGCTAGCATAAAAGCTTTACGTTCACGACAAATGAAAAACTTCCATTTGGCATTGATGATATCTCAGGGCACACCTATGATGCTAATGGGAGACGAGTATGGCCACACTCGCTATGGAAATAACAATAGTTATGGGCATGATTCTTCTATTAATAATTTCTTGTGGGATCAGTTGGATGCGCGGAAGAATGACCACTTTAGGTTTTTCTCCAAAGTTATAGAGTACCGGCATGCACATAAAGTATTCAGTCATGAAAATTTTCTCAGCAAGACTGACATCACGTGGCATGAACACAATTGGGACAACTATGAAAGCAAATTTCTTGCATTCACTCTTCATGACAACAGTGGAGGAGACATCTATTTGGCATTTAATGCTCATGACTTCTTTGTTGAGGTTATGCTTCCAACACCTCCAACTAAGAGGAGCTGGTTTCGTGTGGTGGATACTAATCTTGTCTCTCCCGATGACTTTAACCTTGATGGTCTCCCCTGCAAAGGAAATACCTACAACATTGCACCATACTCCTCCATTCTTCTTGAGGCCAAGTTTTCATTGGAGAATCCCCCTCTCACAATTGTACAATAA 2388 0.4305 MLHQPLLCGSRAATTAHSTLFASSLSGGINASRTSFAGNSFSGHFGLKLNTQASGSKSNSTGGVFNEGRNSGKLRTSNAHGARSTEGVTEEEALQVIESRPSWKTFPGQAFPLGVSEVDNGINFAIFSQHATAVTLCLVPPESGSMDALDGGMIELALDPHLNKTGDVWHICIEDLPRSNVLYGYRIDGPQDWGKGHRFDSNIVLVDPYAKLIEGRRYFGDISMKLFKFLGTYDFDSLPFDWGENCKLPNIPEKDLVIYEMNVRAFTSDESSGLENNIRGSYLGVIEKIPHLLELGINAVELLPVFEFDEMEFQRRPNPRDHMINTWGYSTINFFSPMSRYASAGGGPVNASREFKLMVKALHSAGIEVILDVVYNHTNEADDPNPYTTSFRGIDNKVYYMLDNDGQLLNYSGCGNTLNCNHPVVMELILDSLRHWVTEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAVLSRCKIIAEPWDCGGLYLVGSFPNWDRWAEWNGKYRDDLRKFFKGDAGMKGSFATRVAGSSDLYKVNNRRPYHSINFVIAHDGFTLYDLVSYNCKHNEANGEGGMDGSNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDSSINNFLWDQLDARKNDHFRFFSKVIEYRHAHKVFSHENFLSKTDITWHEHNWDNYESKFLAFTLHDNSGGDIYLAFNAHDFFVEVMLPTPPTKRSWFRVVDTNLVSPDDFNLDGLPCKGNTYNIAPYSSILLEAKFSLENPPLTIVQ 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00973 795 MobiDBLite consensus disorder prediction 53 84 - -
Arst8g00973 795 CDD AmyAc_Glg_debranch 240 679 - -
Arst8g00973 795 MobiDBLite consensus disorder prediction 53 89 - -
Arst8g00973 795 Gene3D Immunoglobulins 95 228 IPR013783 -
Arst8g00973 795 SUPERFAMILY E set domains 107 243 IPR014756 -
Arst8g00973 795 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 112 210 IPR004193 GO:0004553|GO:0005975
Arst8g00973 795 SUPERFAMILY (Trans)glycosidases 239 683 IPR017853 -
Arst8g00973 795 PANTHER GLYCOGEN DEBRANCHING ENZYME 80 783 - -
Arst8g00973 795 Gene3D Glycosidases 236 690 - -
Arst8g00973 795 Gene3D - 691 788 IPR013780 -
Arst8g00973 795 FunFam Glycogen debranching enzyme 236 690 - -
Arst8g00973 795 SMART aamy 260 661 IPR006047 GO:0005975
Arst8g00973 795 SUPERFAMILY Glycosyl hydrolase domain 690 783 - -
Arst8g00973 795 Pfam Alpha amylase, catalytic domain 281 636 IPR006047 GO:0005975
Arst8g00973 795 CDD E_set_GDE_Isoamylase_N 111 260 IPR044505 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00973 Arst-Chr8 13262790 13275502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00973 14 783 Glycoside Hydrolase AT4G09020 71.206 0.0 1145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00973 K01214 - gmx:100806342 1379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00973 8 13262790 13275502 Arst8g00973 8 13262790 13275502 ECH