Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00918 ATGTTGAGGATCCCGGACAACAACAACACCAATAGAAGGAACAACCTTGAAACTACCAGGAATCGCAGAGACGACAATGAATCTTCCTTGTTCGGTGTCGTTCCCAATAACACCTCGCCGCCATTGATGAATCTTCGCCCCGACCACGTTGCCGTCGGCTCACCTCTCACCAACAGAGCCCCTTTCACCACCACCAACAACAACAACGCCGCCGCCTCTCGTTTCGACGGTGGCCCTGTCGGCAGTTCTCCTTATCCAGCTCAGTTTCGCGGCGACCACTGTCTCTGGATGGACACCGATCAGACGTCGGGATTCCACGTGGCAAACACCACCTTCGGCGCCGACAAATGGGTCGACGATCTGGGAGGAGGAGGAAACGCACTGGCGAACAACTTGTCAAGAATGAGCATCGTCGAAAACGGAACCACGAAAAGCAGAAGCCCATACGACGTCGTGGAGGCTTACAGCAACAACAGCGCATGCTCCATTGATTCCAATAACCTCCCTTTCTTCGATGAAACAGCACCGCCGCCATTCTGCAACGCCGCTGCTGGGGTTCCCGTATCGGTGACCCCGGGTTTTGTTCCCAAAGGTTACGCTTTTGAAGCTTCTCCAATGGCTGCGCAGCATCATGATCACCATGTGTACCATCACCATCATCACATCATGGACCAGAGGATGATGAAACAGGCTACAAGCGATAACAACCTTCATCAGTTGCAGCAGAAGCCGCAGCAGCAGCCGCCGCCAACACCGGCTTTCGTAAACCCTTACGTTTGTGACCGTTTCGTTGGGTCTCATCAGCAGCATTTCGGCGTCGAGTGTGAACCTCCCAATGGATGGGGCGGCGGCGTCAAGAACCCCTTCAGATTCTCTCAGATAATGCACCCTAGGCTCCCAGCGAATGCGCCCAGGGATATGGCGGCAATGGCAGTTGCTGCTGCCGCCGCCGCCGCTAACAGCGGTGAGTTTCCTCAGTGTATTTCTCCGATGAGAAATGGTGGTGACCGTGCTGCCTTTAGATGCGATAACAGCGTCATTATTCAAGGAAGAGAAATGGTAAAACCCTGCGTGGAAAGCACTGGTTACGGTGGTTCCGTAAGAGGTTTCAAGAAGGGTCACGGTCAAGGACAGGTTCCATGCGATGAGGATCCATCGTCGGTGCCATTGATGCTGGATTTCTATAACCTAGCTGAGGCGCAGGGTTACGTGTACAACATGGCGAAGGACCAGAACGGTTGCAGGTTTTTGCAGAGGATGGTTGAAGAAGGCACCTTTGAGGATGTAAGGGTGGTTTTTGAAGGGATCGTTGAGAATGTTGTGGAGCTCATGATGGACCCTTTTGGTAACTACCTTGTTCAGAAGCTTCTAGATGTTTGCAATGAAGATCAAAGGTTGCAAATTGTTCTCATGCTCACTAAAGAACAAGGCCAGCTTGTCCGAATCTCCTTGAATACCCACGGCACGCGCGTGGTGCAGAAGCTGATTGAGACCCTCAACTCAGCGAAGCAAATTTCATTGGTGAAGGGTGCAATTCAACCAGGTTTCCTTGACCTTATTAAGGATCTCAATGGAAACCATGTCATACAACGTTGCTTGCAATGTCTTAGCTGTCAAGATAATGAGTTTATTTTTGAAGCTGGTGTAAAGTTTTGTGTTGACATAGCTACTCATCGACATGGATGCTGTGTACTACAACGTTGCATTGATTATTCCGTTGGAAAACATCGTGAGAGGCTGGTCGCAGAAATTTGCAAGCATGGTCTTCTCCTCGCTCAGGATCCATTTGGAAACTATGTTGTTCAGTATATTATAGAGATAGAGAACCCAACTGCCTCAACGAAATTGATGTCTCAGCTGAAAGGGAATTTTGTGAACCTGTCTACACAAAAATTCAGCAGCCATGTGGTTGAGAAATGCCTCAAGCATGTTGCAGATAGCAGGTCCAGAATTGTCCGTGAATTGCTCTCTACACCCCACTTTGAGCAGTTATTGCAAGACCCTTATGCCAACTACGTCATTCAATCTGCTCTTGCATATACCAAGGGTGCACTTCATGTATCATTGGTGGAAGCAGTTAGGCCATACAAGATCTTGCGCACTAGTCCATACTGCAAGAGGATATTCTCTGGAAGTCTACTTAAGAAGTGA 2151 0.4947 MLRIPDNNNTNRRNNLETTRNRRDDNESSLFGVVPNNTSPPLMNLRPDHVAVGSPLTNRAPFTTTNNNNAAASRFDGGPVGSSPYPAQFRGDHCLWMDTDQTSGFHVANTTFGADKWVDDLGGGGNALANNLSRMSIVENGTTKSRSPYDVVEAYSNNSACSIDSNNLPFFDETAPPPFCNAAAGVPVSVTPGFVPKGYAFEASPMAAQHHDHHVYHHHHHIMDQRMMKQATSDNNLHQLQQKPQQQPPPTPAFVNPYVCDRFVGSHQQHFGVECEPPNGWGGGVKNPFRFSQIMHPRLPANAPRDMAAMAVAAAAAAANSGEFPQCISPMRNGGDRAAFRCDNSVIIQGREMVKPCVESTGYGGSVRGFKKGHGQGQVPCDEDPSSVPLMLDFYNLAEAQGYVYNMAKDQNGCRFLQRMVEEGTFEDVRVVFEGIVENVVELMMDPFGNYLVQKLLDVCNEDQRLQIVLMLTKEQGQLVRISLNTHGTRVVQKLIETLNSAKQISLVKGAIQPGFLDLIKDLNGNHVIQRCLQCLSCQDNEFIFEAGVKFCVDIATHRHGCCVLQRCIDYSVGKHRERLVAEICKHGLLLAQDPFGNYVVQYIIEIENPTASTKLMSQLKGNFVNLSTQKFSSHVVEKCLKHVADSRSRIVRELLSTPHFEQLLQDPYANYVIQSALAYTKGALHVSLVEAVRPYKILRTSPYCKRIFSGSLLKK 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00918 716 Gene3D - 392 713 IPR011989 -
Arst8g00918 716 ProSiteProfiles Pumilio RNA-binding repeat profile. 474 509 IPR001313 GO:0003723
Arst8g00918 716 SUPERFAMILY ARM repeat 397 709 IPR016024 -
Arst8g00918 716 ProSiteProfiles Pumilio RNA-binding repeat profile. 547 582 IPR001313 GO:0003723
Arst8g00918 716 ProSiteProfiles Pumilio RNA-binding repeat profile. 619 657 IPR001313 GO:0003723
Arst8g00918 716 MobiDBLite consensus disorder prediction 1 15 - -
Arst8g00918 716 MobiDBLite consensus disorder prediction 230 244 - -
Arst8g00918 716 Pfam Pumilio-family RNA binding repeat 660 681 IPR001313 GO:0003723
Arst8g00918 716 Pfam Pumilio-family RNA binding repeat 478 505 IPR001313 GO:0003723
Arst8g00918 716 Pfam Pumilio-family RNA binding repeat 623 656 IPR001313 GO:0003723
Arst8g00918 716 Pfam Pumilio-family RNA binding repeat 404 436 IPR001313 GO:0003723
Arst8g00918 716 Pfam Pumilio-family RNA binding repeat 590 618 IPR001313 GO:0003723
Arst8g00918 716 Pfam Pumilio-family RNA binding repeat 516 546 IPR001313 GO:0003723
Arst8g00918 716 Pfam Pumilio-family RNA binding repeat 439 469 IPR001313 GO:0003723
Arst8g00918 716 Pfam Pumilio-family RNA binding repeat 552 585 IPR001313 GO:0003723
Arst8g00918 716 ProSiteProfiles Pumilio RNA-binding repeat profile. 399 434 IPR001313 GO:0003723
Arst8g00918 716 ProSiteProfiles Pumilio RNA-binding repeat profile. 511 546 IPR001313 GO:0003723
Arst8g00918 716 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 375 716 IPR033133 GO:0003723
Arst8g00918 716 MobiDBLite consensus disorder prediction 230 252 - -
Arst8g00918 716 FunFam Pumilio homolog 9 391 716 - -
Arst8g00918 716 ProSiteProfiles Pumilio RNA-binding repeat profile. 583 618 IPR001313 GO:0003723
Arst8g00918 716 SMART pum_5 619 653 IPR001313 GO:0003723
Arst8g00918 716 SMART pum_5 583 618 IPR001313 GO:0003723
Arst8g00918 716 SMART pum_5 547 582 IPR001313 GO:0003723
Arst8g00918 716 SMART pum_5 656 691 IPR001313 GO:0003723
Arst8g00918 716 SMART pum_5 399 434 IPR001313 GO:0003723
Arst8g00918 716 SMART pum_5 511 546 IPR001313 GO:0003723
Arst8g00918 716 SMART pum_5 435 470 IPR001313 GO:0003723
Arst8g00918 716 SMART pum_5 474 509 IPR001313 GO:0003723
Arst8g00918 716 ProSiteProfiles Pumilio RNA-binding repeat profile. 435 471 IPR001313 GO:0003723
Arst8g00918 716 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 185 709 - -
Arst8g00918 716 MobiDBLite consensus disorder prediction 1 45 - -
Arst8g00918 716 CDD Pumilio 402 710 IPR033712 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00918 Arst-Chr8 12643247 12647960 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00918 - - aip:107608433 1324.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00918 8 12643247 12647960 Arst8g00918 8 12643247 12647960 ECH
Arst8g00918 8 12643247 12647960 Arst8g00918 8 12643247 12647960 PCT