Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst8g00896 | ATGGCTGCTGAAGTGTATCGCCATGCTATTGGGACTTTTCAGTCTCATTCTTATGCCAACAATGTTAATCATAAGCAGAGGCTCAGGAACAATTTCGTGAGATTGGTGAATAACGATTCTGTGAGTAACAATGTCTTGTCAAGCAGAGGAGCTAGGTATTCTAGCTGCAGTAACCGTCGCAGTGTTATTCGATCTTCGGCTTCTCAAACATCGGTGGCAGATCCAGTTTCATTATCCCCTTCGAGAACCCCCACCACTGACACTAACAAGAAATCAAATGAAGCGGCTTTGATCCTCATTAGGCATGGTGAGTCGCTGTGGAATGAAAAGAACTTATTCACAGGTTGTGTTGATGTTCCACTAAGCAAGAAGGGCATAGATGAGGCAATAGAAGCTGGCAAAAGAATTAGCAGCATTCCAGTTGATGTGATATTTACATCTGCTTTGATTCGGGCACAAATGACAGCCATGCTGGCCATGACCCAGCATCGTCGTAAGAAGGTGCCTATCATCATTCATAATGAAAGTGAACAAGCAAGGCAATGGAGTCAAGTTTTTAGTGAAGACACTAAAAAACAGTCTATACCAGTCATAGCATCATGGCAATTAAATGAAAGAATGTATGGGGAATTACAGGGTCTCAATAAACAAGAAACAGCTGACAGATATGGAAAAGAGCAAGTCCATGAGTGGCGCAGAAGCTATGACACACCTCCTCCCAATGGAGAAAGTTTGGAAATGTGTGCTGAAAGAGCAGTTGCCTATTTTAGAGACCAAATTGAACCTCAACTTTTATCTGGAAAGAATGTTATGATTGCTGCCCACGGAAACTCCCTGAGATCCATTATCATGTATCTGGACAAGTTAACTTCCCAAGAGGTCATTAGTTTGGAACTGTCAACTGGAATTCCCATGCTGTATATTTTCAAAGAGGGAAGATTCATTAGGAGGGGGAGTCCCATAGGACCACAGGAAGCTGGGGTTTATGCTTACACCAAGCGATTGGCTCTTTACAGACAGAAGTTGGATGAGATGTTCTAA | 1041 | 0.4265 | MAAEVYRHAIGTFQSHSYANNVNHKQRLRNNFVRLVNNDSVSNNVLSSRGARYSSCSNRRSVIRSSASQTSVADPVSLSPSRTPTTDTNKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRKKVPIIIHNESEQARQWSQVFSEDTKKQSIPVIASWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDTPPPNGESLEMCAERAVAYFRDQIEPQLLSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPQEAGVYAYTKRLALYRQKLDEMF | 346 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst8g00896 | 346 | SMART | PGAM_5 | 96 | 282 | IPR013078 | - | |
| Arst8g00896 | 346 | Hamap | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. | 94 | 321 | IPR005952 | GO:0006096|GO:0016868 | |
| Arst8g00896 | 346 | PANTHER | PHOSPHOGLYCERATE MUTASE | 89 | 333 | IPR005952 | GO:0006096|GO:0016868 | |
| Arst8g00896 | 346 | Pfam | Histidine phosphatase superfamily (branch 1) | 180 | 300 | IPR013078 | - | |
| Arst8g00896 | 346 | Pfam | Histidine phosphatase superfamily (branch 1) | 97 | 173 | IPR013078 | - | |
| Arst8g00896 | 346 | ProSitePatterns | Phosphoglycerate mutase family phosphohistidine signature. | 99 | 108 | IPR001345 | GO:0003824 | |
| Arst8g00896 | 346 | MobiDBLite | consensus disorder prediction | 62 | 90 | - | - | |
| Arst8g00896 | 346 | SUPERFAMILY | Phosphoglycerate mutase-like | 97 | 313 | IPR029033 | - | |
| Arst8g00896 | 346 | CDD | HP_PGM_like | 97 | 316 | IPR013078 | - | |
| Arst8g00896 | 346 | Gene3D | - | 86 | 317 | IPR029033 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Arst8g00896 | Arst-Chr8 | 12369966 | 12373723 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arst8g00896 | K01834 | - | gmx:100802621 | 573.163 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Arst8g00896 | 8 | 12369966 | 12373723 | Arst8g00896 | 8 | 12369966 | 12373723 | ECH | |
| Arst8g00896 | 8 | 12369966 | 12373723 | Arst8g00896 | 8 | 12369966 | 12373723 | PCT |