Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00871 ATGGGTTCGGTTTTCAGTGCTGCAAATGCTATACCTAAGCTGAATGAAGTCTCTTCGAACGAGACGTGCAAGAGGCAGAAGATGTCATTATCTACATTTGATGAAGAGAGTCCAAGATTGATTCCTAATCTTCCTGATGAGTTATCACTTCAGATTCTTGCTAGGCTTCCGAGAATATCTTACTTCAATGTAAGATTGGTGTCAAGGAAGTGGAAAGCAACTATCATGAGTCCAGAAATATATGAAGTAAGAAAAGAACTCCGGACCTCTGAAGAGTGGCTATATCTGTTGATCAAGGTTGGGGAATATAAACAGCAATGGTATGCTGTTGATCCTCACTCTCAGATATGGCAGAGACTACCTACTATGCCTAAAGTTGCTGAAGAGCAAGAATCAAGAAAGAGTTCTTCCAAGCTTTGGATGTGGAACATGGTAGAAGGTAACAGAATAGCCAAAGTTATCAGAGGCTTTCTTGGACATAAGGATGCATTCGATGAAATGCCCTTTTTTGGTTGTGCTATAGGAGCTGTTGATGGATGTCTCTATGTTCTAGGAGGATTCTCTAAAGCTTCAACTACAAGCAGCGTCTGGCGATTTGATCCAATGCAAAACACATGGAGCAAGGTGACTCCTATGTCCACAGGTAGAGCATACTGCAAGACCGGAATCTTAAACAATAAGCTTTATGTTGTTGGAGGGGTTAGCCAAGGCCAAGCCGGACTAATTCCTCTTCAATCTGCCGAAGTTTTCGACCCTTCGACTGATACATGGTCAGATGTCCCTAGCATGCCATTCTCCAAAGCTCAAGTCATGCCAACAGTATTTTGGGCCGACATGTTAAAGCCTATTGCCACGGGATTAACCTCATACATGGGAAGATTGTGTGTTCCACAAAGCCTATATTCATGGCCATTTTTCGTTGACGTCGGCGGAGAAATCTATGATCCCGAGACAAACTCATGGATTGAAATGCCAACTGGGATGGGTGAGGGTTGGCCTGCAAGACAAGCAGGTTCAAAATTGAGTGTAGTAGTGGATGGTGAGTTATATGCATTTGATCCTTCAAATTCCCCAGATAGTGGAAGGATCAAGGTGTATGACCAAGGAGAAGATGCTTGGAAAGTTGTGATTGGAAAAGTTCCAATACATGATTCAGCAAATTCAGAGTCACCATATTTGCTTGCTGGCTTCCATGGGAAACTTCATGTGATTACAAAAGATGCAAATCATGATGTTGCTGTTTTGAGGGCTGATCTGAGAAACAACCGGGATTGTTCTTCTCCCTCAATATCTTCAACTTCTTCATCATCATCATCATCATCATCACACAGTGCTGCTGAATCAGATGCAGTTGTTTGGAAGGTAGTTGCAAGCAGGGATTTTGGGAAGGCTGAACTTGTCAGTTGCCAAGTTATTGACATATAA 1425 0.4253 MGSVFSAANAIPKLNEVSSNETCKRQKMSLSTFDEESPRLIPNLPDELSLQILARLPRISYFNVRLVSRKWKATIMSPEIYEVRKELRTSEEWLYLLIKVGEYKQQWYAVDPHSQIWQRLPTMPKVAEEQESRKSSSKLWMWNMVEGNRIAKVIRGFLGHKDAFDEMPFFGCAIGAVDGCLYVLGGFSKASTTSSVWRFDPMQNTWSKVTPMSTGRAYCKTGILNNKLYVVGGVSQGQAGLIPLQSAEVFDPSTDTWSDVPSMPFSKAQVMPTVFWADMLKPIATGLTSYMGRLCVPQSLYSWPFFVDVGGEIYDPETNSWIEMPTGMGEGWPARQAGSKLSVVVDGELYAFDPSNSPDSGRIKVYDQGEDAWKVVIGKVPIHDSANSESPYLLAGFHGKLHVITKDANHDVAVLRADLRNNRDCSSPSISSTSSSSSSSSSHSAAESDAVVWKVVASRDFGKAELVSCQVIDI 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00871 474 Pfam F-box domain 42 79 IPR001810 GO:0005515
Arst8g00871 474 ProSiteProfiles F-box domain profile. 38 84 IPR001810 GO:0005515
Arst8g00871 474 Gene3D - 84 388 IPR015915 GO:0005515
Arst8g00871 474 PANTHER OS02G0202900 PROTEIN 19 473 IPR045887 -
Arst8g00871 474 Gene3D - 26 80 - -
Arst8g00871 474 SMART kelc_smart 227 277 IPR006652 GO:0005515
Arst8g00871 474 SMART kelc_smart 180 226 IPR006652 GO:0005515
Arst8g00871 474 SMART fbox_2 44 84 IPR001810 GO:0005515
Arst8g00871 474 MobiDBLite consensus disorder prediction 424 443 - -
Arst8g00871 474 Pfam Kelch motif 170 213 IPR006652 GO:0005515
Arst8g00871 474 Pfam Kelch motif 216 264 IPR006652 GO:0005515
Arst8g00871 474 CDD F-box_AtAFR-like 40 84 - -
Arst8g00871 474 SUPERFAMILY Kelch motif 101 404 IPR015915 GO:0005515
Arst8g00871 474 SUPERFAMILY F-box domain 37 122 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00871 Arst-Chr8 11957274 11960305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00871 41 260 EF-hand Containing Proteins AT4G39560 26.244 6.77e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00871 - - gmx:100806691 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00871 8 11957274 11960305 Arst8g00871 8 11957274 11960305 ECH
Arst8g00872 8 11957274 11960304 Arst8g00871 8 11957274 11960305 PCT