Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00730 ATGCCAGCTTCTTCTCCTTCAGAGAACCGCACAAAATGGAGGAAGCGGAAGAGGGAATCGCAAATCAGTCGCCGCCACCAGAAGCACCAGCACCACCACGAAGATGACGACGATGAAGAAGAAGAGAACCCCAATGCCGACAACAACGAAGACCACGACGACGATTCTGAGGACCAAACCCCTAATCCCCAATCTGCTTCCCCTCACCACCACGAGATCGAGGTGCTCTCCGATCACGCCGTCCAGATTTCGCATTTCCCCACTGTTCTCAAGCGCTCCGTTAACCGCCCACACTCCTCCGTCGCCACCGTCATCGCTCTCGAGCGCGCCGCACTCGCCGGCGACTCCAAGGCCCACCAACAGCTCCACAACAGCGGCAGCATTCCGTTCCTCGAGAATGTTTCTCACGGCCAGCTCCAGGCCCTCTCCACCGTCCCGGCTGACAGCCCCTCCCTCGATCATGACCGCGACGGCGGCAGCAGCAGCTCCTCTTTTGTTATCACTCCTCCGCCAGTTTTGGAAGGACGTGGTGTTGTTAAGCGCTTTGGAAATAGGGTTCTTGTTGTTCCAATGCATTCAGATTGGTTTTCACCAGCCACAGTGCATCGTCTAGAGAGACAAGCAGTGCCGCATTTCTTTTCTGGAAAATCACCAGGTCATAGTCCGGAGAAGTATATGGAGTGCAGGAACTATATTGTTGGGCTCTACATGGAGGACCCTGGGAAGAGGATTACTGTCTCTGATTGTCAGGGATTGTTGGTTGCAGTTGACAAAGAAGATTTAGCTCGGATTGTCCGGTTCCTTGATCATTGGGGAATCATCAATTACTGTGCTTTGGAGTCATGTCATGCGCCATTTAATGATGCATCCTTCCTGAAGGAGGAGACAAGTGGAGAAGTCCGCGTGCCCTCAGAGTTTCTAAAATCCATAGATAGTCTGATAAGTTTTGACAAGCCCAAGTGTAAGGTCAAAGCAGAAGAAATTTATTCATCATTCACAATGCACAATGCTGATGTCACTGATCTGGACAACAGGATACGGGAACATCTATCCGAAAATCATTGCCATTGTTGTTCTCGTCCTCTTCCTGCTGTACACTATCAGTCACAAAAAGAGGTTGATATTTTACTTTGTACTGGCTGCTTTCATGATGGGAGATTTGTCGTTGGACATTCAAGTATAGATTTTGTTAGGGTGGATTCGTCCAGGGATTATGGTGAGGGAGATGGGGATAGTTGGACTGATCAAGAAACTTTGTTGCTGCTTGAAGCAATGGAGATTTACAATGAGAATTGGAATGAAATTGCCGAACATGTTGGGACCAAGTCAAAAGCACAATGCATTCTTCATTTTCTTCGTCTACCAATGGAAGATGGAAAATTGGAAAATATCAACATTCCAAGTGTGTCTTTGCCATCCAATGTGATGAATAGAAATGATAGTGGAAGAATGCATGGCTACGTAAACGGAGATTCTGCAGGAACTGTCCGCCAAAGCAGAGATTCTGACAGCAGGTTTCCTTTTGCCAATTCTGGAAATCCTGTTATGGCTTTGGTAGCCTTTTTAGCCTCTGCCGTTGGACCAAGAGTAGCTGCTGCTTGTGCTCATGCAGCATTAGCAGTATTATCAGAGGATACTTCTGGCAGCACATCGCAAATGGAAGTACAAGGACATGATAATAGGTCAAATTCAGAAAGTGCACATAGTAGAGATCGTGGAGAAACTGCAATTTCAAATAATCATAATGAGGACAAGGCAAAACTTGTTGGTTCACGAGGTCAAAATGAAGGCGGGACAACACCACTATCTGTTGAGAAAGTTCAAGATGCAGCAAAGGCAGGCCTCTCTGCTGCAGCCATGAAATCTAAATTGTTTGCTGATCATGAAGAACGAGAAATCCAGAGGCTATGTGCTAGTATCGTTAGTCATCAGTTGAAAAGATTGGAATTGAAGCTGAAGCAGTTTGCTGAAATTGAAACATTATTGATGAAAGAATGTGAACAAGTTGAGAGGACAAGGCAGAGATTTGCTGCTGAGCGGTCCCGTATTATATCTGCTCGTCTTGGAACTGGAGGAGCCACACCTCCACCATCAGGTGTTGGTCCTTCCATGTCTAACAGTAATGGCAACAGTAGGCCACAAATGATCTCTGCGTCTCCCTCGCAGCCCAGCATCTCGGGGTATGGCAACAACCAACCAGTTCATCCACACATGTCCTTTGCCCCGAGACCTTCTATGTTTGGTTTGGGACAAAGACTGCCCCTATCTATGATACAACAATCTCAATCACCTTCAAATGCCATGTTCAATGCCCCTAGTAATGTGCAACCCACTTCCAATCATCCATTGTTGAGGCCTGTATCAGGGACTAACTCTGGTTTAGGTTAA 2388 0.4698 MPASSPSENRTKWRKRKRESQISRRHQKHQHHHEDDDDEEEENPNADNNEDHDDDSEDQTPNPQSASPHHHEIEVLSDHAVQISHFPTVLKRSVNRPHSSVATVIALERAALAGDSKAHQQLHNSGSIPFLENVSHGQLQALSTVPADSPSLDHDRDGGSSSSSFVITPPPVLEGRGVVKRFGNRVLVVPMHSDWFSPATVHRLERQAVPHFFSGKSPGHSPEKYMECRNYIVGLYMEDPGKRITVSDCQGLLVAVDKEDLARIVRFLDHWGIINYCALESCHAPFNDASFLKEETSGEVRVPSEFLKSIDSLISFDKPKCKVKAEEIYSSFTMHNADVTDLDNRIREHLSENHCHCCSRPLPAVHYQSQKEVDILLCTGCFHDGRFVVGHSSIDFVRVDSSRDYGEGDGDSWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINIPSVSLPSNVMNRNDSGRMHGYVNGDSAGTVRQSRDSDSRFPFANSGNPVMALVAFLASAVGPRVAAACAHAALAVLSEDTSGSTSQMEVQGHDNRSNSESAHSRDRGETAISNNHNEDKAKLVGSRGQNEGGTTPLSVEKVQDAAKAGLSAAAMKSKLFADHEEREIQRLCASIVSHQLKRLELKLKQFAEIETLLMKECEQVERTRQRFAAERSRIISARLGTGGATPPPSGVGPSMSNSNGNSRPQMISASPSQPSISGYGNNQPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQSPSNAMFNAPSNVQPTSNHPLLRPVSGTNSGLG 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00730 795 Pfam SWIRM domain 190 276 IPR007526 GO:0005515
Arst8g00730 795 Pfam Myb-like DNA-binding domain 412 454 IPR001005 -
Arst8g00730 795 MobiDBLite consensus disorder prediction 545 602 - -
Arst8g00730 795 Pfam SWIRM-associated region 1 613 688 IPR032451 -
Arst8g00730 795 FunFam SWI/SNF complex subunit SMARCC2 isoform c 193 281 - -
Arst8g00730 795 CDD SANT 412 454 IPR001005 -
Arst8g00730 795 Gene3D - 409 459 - -
Arst8g00730 795 SMART sant 409 457 IPR001005 -
Arst8g00730 795 MobiDBLite consensus disorder prediction 37 57 - -
Arst8g00730 795 ProSiteProfiles Myb-like domain profile. 412 455 IPR001005 -
Arst8g00730 795 ProSiteProfiles SANT domain profile. 408 459 IPR017884 -
Arst8g00730 795 SUPERFAMILY Homeodomain-like 186 282 IPR009057 -
Arst8g00730 795 FunFam SWI/SNF complex subunit SMARCC2 isoform C 408 459 - -
Arst8g00730 795 PANTHER SWI/SNF COMPLEX-RELATED 62 683 - -
Arst8g00730 795 MobiDBLite consensus disorder prediction 561 590 - -
Arst8g00730 795 MobiDBLite consensus disorder prediction 699 733 - -
Arst8g00730 795 MobiDBLite consensus disorder prediction 760 795 - -
Arst8g00730 795 ProSiteProfiles Zinc finger ZZ-type profile. 349 404 IPR000433 GO:0008270
Arst8g00730 795 MobiDBLite consensus disorder prediction 545 560 - -
Arst8g00730 795 SUPERFAMILY Homeodomain-like 410 463 IPR009057 -
Arst8g00730 795 MobiDBLite consensus disorder prediction 145 166 - -
Arst8g00730 795 ProSiteProfiles SWIRM domain profile. 187 285 IPR007526 GO:0005515
Arst8g00730 795 MobiDBLite consensus disorder prediction 688 737 - -
Arst8g00730 795 Gene3D - 193 279 IPR036388 -
Arst8g00730 795 MobiDBLite consensus disorder prediction 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00730 Arst-Chr8 10172183 10176935 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00730 355 451 EF-hand Containing Proteins AT3G07740 32.075 1.42e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00730 K11649 - gmx:100780440 1167.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00730 8 10172183 10176935 Arst8g00730 8 10172183 10176935 ECH