Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00719 ATGGAAGTGCCGGAGTGCCCGGTGTGCCTCGAACGCTACGACAACCAAGTTTCCATCCCTAGGGTCCTATCTTGCGGTCACTCCGTCTGCGAAGCATGCCTCGTGGAGCTTCCGCTGCGGTTCCCGAACACGATTCGGTGCCCGGCGTGTACACAGCTCGTTAAGTACTCTTCAGAGCAAGGACCTTCGTCTCTTCCAAAGAACATCGACCTTCTCAGGCTTTGCCTCTCTTCATCATCTTCTTCTTCTTCGCGATCGGTGAAACCGACTCAACGGTCAACGATCGACGGTTGTGATGATCGGTCTGTAATTCGAGATCGGTTCTGGTCCGACGAGTTCTATGCCAAGTGGAAGGACTGGATTCTCCCGCACGACGCAGTTTCGGTGGAGTCCCGACCTGAACCCGAATCCGAACCCAGCGGGTTTGTGTTGCGAGGGCAATTTGGTTCGAGTTCTTCGTTGAAGGGTAGGGTTAGTGTTTGTTCTCGAAATAGCAAGTGTTTGAGCCTTGTTCCTGTTTTTTCTTTACCTCGTGTTTTGAATTGTTCGAAGTTTAAGTTCAGTTATGCTGCGAGGATTATGGAATGTTTGGTGGGGATGAAGGAGGCTGTGAGGGAGGAGTTAGCTTTGATTCTAGAAGCTTCTGTGAGGCAGGGCAGGGTTTTTAGGGTTTATGGGTTGTGGAGTGAAGTGGAGGTAGTGGATGGGTCATTGTACCTGGTGTGTGAGAGGCACAATGGTGGTAGCATTTTGCAGAAGTTTGGTGAATTGAAGAATGGGTTCCTTGGTTTGGGATTGGAAGATAAAAAAGATGGGATTTTAAGCTTTGCTGTGATTGGGAAGAGTGTGTGTGATTCTATGCTGGCTTTGCATTTGGAAGGTTTGGCTGCTGGTTGTTTAGGACCTTCGTGCTTTGCTTTCGATGAGCTTGGTGGTGTTTGTGTTGATTTGAATGAGGTTTTGGTTATGAGAAGGAAGACTGTGTATAGTTTTTCTGGTGGCAACAAGGTTAGGCAGAAAGACGAGGGATTGTTTAAGGGTTGTTTAAAAACTGAGCTTTTTTTATGCCCTGAGGTTTTGTTTCGATTACTGCAGAAGGATGCTGCTGTTAATCCGGAGGATGAGCATTCCAGATATCCGTTCGGGTATGGCTCAGATGTGTGGTCATTGGCTTGTGTGCTGTTGTGGCTTCTCATTGGAGATGCACTCCCTCAGATTCCCTTTGAAATGAGTGAAGAGAATGGCTTTGACTTATCAGCTAGTTATGTTTGTTGGGTGGAGAAAGTTAGTTCTGTTTTGGAAGACAAACTTGGCTCTGAATATCCGTCATTGAGGGGGACACTTTGCAAATGTTTGGACATGAATCCGGGAAACCGCATGAGTGTGGTGGATGTGCGGAAGTGCATTCAGGATATGTTACTCAAACCTGAATTCGATTTTCTGGAAAACTTGGAGGTCATGGTTAATCGGAGCAGCACTGGTTGCTGCTTGGTTCTTGATGAGTTGAATGAAAAAGAAGACAATGGGCCACCAGATGTTGTTGATGGGGAAGAGAAACCCGATGCAGATTTGGTTGCTAGCTTATCTAAGGGAATGGCTGAACTTAAAGATCTGCGAGGACATCTGGATTGTATCTCTGGATTAGCAATTGGCGGGGGATATCTGTTTAGCTCTTCGTTTGATAAAACTGTCAAAGTATGGTCGTTGCTGGACTTTTCTGTTTCACACACGTTTAAAGGTCATGAGGATAAAGTCATGGCTATAGTTTATGTAGATGATAAAGAACCATTGTGTGTAAGTGGTGATAATGGAGGGGGCATATTTGTCTGGGGACTTTCTGCTCCTCTCAGGCAAGACCCCTTAAGGAAATGGTATGAGCAGAAGGATTGGCGCTTCAGTGGTATCCATTCGTTAACTGTTTCAGCAAGTCGTTGTCTCTACACCGGAAGTGGAGATAGAACAATAAAAGGATGGAACTTTGATGTGCACAATGACTGGTCATAG 2004 0.4616 MEVPECPVCLERYDNQVSIPRVLSCGHSVCEACLVELPLRFPNTIRCPACTQLVKYSSEQGPSSLPKNIDLLRLCLSSSSSSSSRSVKPTQRSTIDGCDDRSVIRDRFWSDEFYAKWKDWILPHDAVSVESRPEPESEPSGFVLRGQFGSSSSLKGRVSVCSRNSKCLSLVPVFSLPRVLNCSKFKFSYAARIMECLVGMKEAVREELALILEASVRQGRVFRVYGLWSEVEVVDGSLYLVCERHNGGSILQKFGELKNGFLGLGLEDKKDGILSFAVIGKSVCDSMLALHLEGLAAGCLGPSCFAFDELGGVCVDLNEVLVMRRKTVYSFSGGNKVRQKDEGLFKGCLKTELFLCPEVLFRLLQKDAAVNPEDEHSRYPFGYGSDVWSLACVLLWLLIGDALPQIPFEMSEENGFDLSASYVCWVEKVSSVLEDKLGSEYPSLRGTLCKCLDMNPGNRMSVVDVRKCIQDMLLKPEFDFLENLEVMVNRSSTGCCLVLDELNEKEDNGPPDVVDGEEKPDADLVASLSKGMAELKDLRGHLDCISGLAIGGGYLFSSSFDKTVKVWSLLDFSVSHTFKGHEDKVMAIVYVDDKEPLCVSGDNGGGIFVWGLSAPLRQDPLRKWYEQKDWRFSGIHSLTVSASRCLYTGSGDRTIKGWNFDVHNDWS 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00719 667 SUPERFAMILY RING/U-box 5 58 - -
Arst8g00719 667 ProSiteProfiles Zinc finger RING-type profile. 6 51 IPR001841 -
Arst8g00719 667 Gene3D Transferase(Phosphotransferase) domain 1 200 473 - -
Arst8g00719 667 SMART ring_2 6 50 IPR001841 -
Arst8g00719 667 Pfam zinc-RING finger domain 5 52 IPR001841 -
Arst8g00719 667 SMART serkin_6 142 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00719 667 ProSiteProfiles Protein kinase domain profile. 137 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00719 667 SMART WD40_4 531 568 IPR001680 GO:0005515
Arst8g00719 667 SMART WD40_4 571 611 IPR001680 GO:0005515
Arst8g00719 667 SMART WD40_4 617 659 IPR001680 GO:0005515
Arst8g00719 667 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 86 IPR013083 -
Arst8g00719 667 Pfam WD domain, G-beta repeat 535 568 IPR001680 GO:0005515
Arst8g00719 667 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Arst8g00719 667 SUPERFAMILY WD40 repeat-like 522 660 IPR036322 GO:0005515
Arst8g00719 667 PANTHER - 1 660 IPR044715 -
Arst8g00719 667 SUPERFAMILY Protein kinase-like (PK-like) 217 477 IPR011009 -
Arst8g00719 667 Gene3D - 517 665 IPR015943 GO:0005515
Arst8g00719 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 538 577 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00719 Arst-Chr8 10036753 10039398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00719 5 102 Miscellaneous Gene Families AT1G74370 31.304 1.99e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00719 - K03070 lja:Lj1g3v0874380.1 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00719 8 10036753 10039398 Arst8g00719 8 10036753 10039398 ECH