Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00717 ATGGCCACCACCGTGCCGGCGTTCTCATATGCGCCTTCCTTCGCTATCAAACCTCCACACACCGACGCCAATGCCTCCTCCTTTATTCCACCCTCTTCTCTTTCTCATCCTTCCTCCTTCTCTCCCCTCAGACGACGTCGTTTCACACGCGCCCCCGTTGTTGCCGCCCTTGCCCCTTCCAAGGGGACGCTAGGTAGTATTAGAAAGAGTCTCAACGATTTCATGAGCTTGAACTACTGGGTTGTTCGTGATTACTACCGCCTTGTTAGCTCTGTTAACTCCTTCGAGGCCCACATTCAGAAACTCTCCGACGAACAGTTAACGGCCAAGACGGAGGAGTTTCGCAGGAGGCTCGGACGTGGCGAGACCCTTGGAGATATTCAAGCTGAGGCGTTTGCTGTTGTTCGTGAAGCTGCATGGAGGAAGCTTGGGATGCGCCATTTTGATGTTCAGATTATTGGTGGGGCAGTACTGCATGATGGGTCAATTGCCGAGATGAAAACAGGGGAGGGGAAAACATTGGTTTCCACGTTAGCAGCGTATCTTAATGCCCTCACTGGTGAGGGTGTTCATGTGGTAACCGTCAATGATTATTTAGCTCAGCGTGATTCTGAATGGATGGGGAGTGTTCATCGCTTCTTAGGTCTTTCTGTAGGCCTTATTCAGAAGGGGATGAATGCTGCAGAGCGGAGATCCAACTATAGATGTGATATAACATATACCAATAACTCTGAACTTGGCTTTGATTATTTACGAGATAATCTTGCTGGAAATAGGGAAGACCTTGTGATGAGATGGCCAAAACCATTTCATTTTGCAATTGTTGATGAAGTGGATTCTGTCCTGATAGATGAAGGAAGAAATCCTTTGTTAATAAGCGGTGAGGCTAGTAAGGATGCTGCACGATATCCTGTTGCTGCAAAAGTAGCTGAACTGCTTGTGCAGGGCACTCATTATAACGTGGAGCTTAAAAATGAGTCAGTGGAGTTGACTGAGGAAGGAATTGCTCTTGCTGAAATGGCTCTTGAAACCAATGACCTTTGGGATGAAAATGATCCCTGGGCTAGGTTTGTGATGAACGCTTTAAAAGCTAAAGAGTTCTATCGACGAGATGTAGAGTACATAGTCCGAGATGGGAAGGCTTTAATTATCAATGAGCTGACAGGAAGAGTTGAAGAGAAACGGAGATGGTCTGAGGGGATTCACCAGGCTGTGGAGGCAAAGGAAGGTTTGAAGATTCAGGCAGATTCCGTTGTTGTGGCACAAATCACTTACCAGTCATTATTCAAGCTCTATCCAAAATTGTCAGGAATGACTGGGACTGCAAAAACAGAAGAGAGAGAATTCTTAAAAATGTTCCAGATGCCAGTCATTGAAGTGCCCACAAATCTTCCTAATATTCGTAAAGATCTTCCTATTCAAGCTTTCGCCACTGCTCGTGGGAAATGGGAGCAAGTTCGCCGAGAAGTTGAATATATGTTTAGACAAGGCCGTCCTATTTTAGTTGGGACAACTAGTGTAGAAAATTCTGAACTTTTGGCTGGTCTGCTTTGGGAGTGGAATATTCCCCACAATGTCCTGAATGCTCGACCTAAGTATGCTGCAAGAGAAGCTGAAATTGTTGCACAGGCAGGACGCAAACATGCCATTACCATCTCTACAAATATGGCAGGCAGGGGCACGGATATAATCCTTGGAGGAAATCCAAAAATGCTTGCCAGAGAAATTATAGAGGATAGCGTAATTCATTTATTGACACAACAGGTTCCAAATGTTGAACTTGCTAGTGAGACTGTTTCGCGACAGGTGCTTCCAAAGATAAAGGTTGGTAACTCAAGATTTTATATTCTTTGCAACATGAATTATTCAGCCAAATATGTCTCGAAAAGTGAGGGTAGAAACTGGACATATCAGAAGGCTAAATCCTTGATCACAGAGGCTATTCAATTTAGTCTGTCATATAGTTTTGAGGAGCTGGAGGAGCTTGCTAATGAAGATTCTGAATTTTACCCTCTTGGTCCAACAGTAGCACTTGCCTATGTGTCAGTTCTGAAGGATTGTGAAGAGCACTGTTTGCATGAAGGCTCTGAAGTTAAAAGGCTTGGTGGCCTTCATGTAATTGGTACATCTTTACATGAGTCCCGGAGAATAGATAACCAGCTCCGTGGCAGAGCAGGAAGGCAGGGAGATCCAGGTTCAACGCGATTTATGGTTAGCTTGCAGGACGAGATGTTTCAAAAGTTCAATTTTGATACGGAATGGGCTGTCAGACTTATATCAAAGATTACAAATGATGAGGATATGCCAATTGAGGGTGATGCCATTGTGAAGCAGCTCTTGGGGTTGCAAATCAATGCAGAGAAGTTCTTCTTCAGCATAAGAAAGAGCCTAGTTGAATTTGATGAAGTATTGGAGGTGCAGCGAAAGCATGTTTATGATCTAAGGCAGTTGATCTTGACTGGAGATGATGAAAGCTGTTCCCAACACATATTCCAGTACATGCAAGCAGTTGTGGATGAGATTGTCTTCAGTAACATCAATCCAATGAAGCATCCATGTACCTGGAGTTTGAGTAAGCTCTTGAAAGAGTATATGACAATTGGTGGAAAGCTGCTTCATGAATCTTTTGGAGGGATCACCGATGACTCTTTGTTAACCTCACTTGAGCAACTGAATGATGCGGGTTCCATTGATATTGTCAACTTTTCCCTTCCAAATCTGCCCACACCTCCAAATGCGTTCAGGGGAATCCGCAGGAAAAGCTCTTCATTAAGACGTTGGCTTGTTATTTGCTCTGATGATCTAATCGAGAACGGGAAGTATCGGACAACATCTAATCTCCTCCGCAAATATCTTGGAGATTTTCTAATTGCTTCATATCTAAATGTTGTTGAAGAGTCTGGTTATGAAGATAAATATGTCAAGGAAATTGAGAGAGCTGTTCTTTTGAAAACTCTTGATTGCTTCTGGAGAGATCACCTTGTAAACATGAATCGGCTCAGTTCTGCAGTGAATATAAGGAGCTTTGGGCACAGAAACCCTCTTGAAGAGTACAAAATTGACGGTTGCCGTTTTTTCATCTCAATGCTTAGTGCAACAAGGAGGTTAACTGTAGAAGCGCTGTTACAGCATTGGTCATCTCCAATGGAATCACTTGAACTATCTTGA 3168 0.4372 MATTVPAFSYAPSFAIKPPHTDANASSFIPPSSLSHPSSFSPLRRRRFTRAPVVAALAPSKGTLGSIRKSLNDFMSLNYWVVRDYYRLVSSVNSFEAHIQKLSDEQLTAKTEEFRRRLGRGETLGDIQAEAFAVVREAAWRKLGMRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDSEWMGSVHRFLGLSVGLIQKGMNAAERRSNYRCDITYTNNSELGFDYLRDNLAGNREDLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDAARYPVAAKVAELLVQGTHYNVELKNESVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVEYIVRDGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEREFLKMFQMPVIEVPTNLPNIRKDLPIQAFATARGKWEQVRREVEYMFRQGRPILVGTTSVENSELLAGLLWEWNIPHNVLNARPKYAAREAEIVAQAGRKHAITISTNMAGRGTDIILGGNPKMLAREIIEDSVIHLLTQQVPNVELASETVSRQVLPKIKVGNSRFYILCNMNYSAKYVSKSEGRNWTYQKAKSLITEAIQFSLSYSFEELEELANEDSEFYPLGPTVALAYVSVLKDCEEHCLHEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFNFDTEWAVRLISKITNDEDMPIEGDAIVKQLLGLQINAEKFFFSIRKSLVEFDEVLEVQRKHVYDLRQLILTGDDESCSQHIFQYMQAVVDEIVFSNINPMKHPCTWSLSKLLKEYMTIGGKLLHESFGGITDDSLLTSLEQLNDAGSIDIVNFSLPNLPTPPNAFRGIRRKSSSLRRWLVICSDDLIENGKYRTTSNLLRKYLGDFLIASYLNVVEESGYEDKYVKEIERAVLLKTLDCFWRDHLVNMNRLSSAVNIRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVEALLQHWSSPMESLELS 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00717 1055 CDD DEXDc_SecA 106 462 - -
Arst8g00717 1055 Pfam SecA preprotein cross-linking domain 302 406 IPR011130 GO:0016020|GO:0017038
Arst8g00717 1055 PANTHER SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM 62 1054 IPR000185 GO:0005524|GO:0006605|GO:0006886
Arst8g00717 1055 FunFam Protein translocase subunit SecA 915 1044 - -
Arst8g00717 1055 PANTHER SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM 62 1054 IPR000185 GO:0005524|GO:0006605|GO:0006886
Arst8g00717 1055 Gene3D - 296 416 - -
Arst8g00717 1055 NCBIfam preprotein translocase subunit SecA 92 863 IPR000185 GO:0005524|GO:0006605|GO:0006886
Arst8g00717 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 465 752 IPR027417 -
Arst8g00717 1055 Gene3D Helical scaffold and wing domains of SecA 774 886 - -
Arst8g00717 1055 SMART SecA_PP_bind_2 295 406 IPR011130 GO:0016020|GO:0017038
Arst8g00717 1055 FunFam Protein translocase subunit SecA 774 893 - -
Arst8g00717 1055 Pfam SecA Wing and Scaffold domain 769 1043 IPR011116 GO:0016020|GO:0017038
Arst8g00717 1055 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 153 316 IPR014001 -
Arst8g00717 1055 CDD SF2_C_secA 468 739 IPR044722 -
Arst8g00717 1055 Pfam SecA DEAD-like domain 82 449 IPR011115 GO:0005524|GO:0016020|GO:0017038
Arst8g00717 1055 Hamap Protein translocase subunit SecA [secA]. 66 1047 IPR000185 GO:0005524|GO:0006605|GO:0006886
Arst8g00717 1055 Gene3D - 465 771 IPR027417 -
Arst8g00717 1055 PRINTS SecA protein signature 424 441 IPR000185 GO:0005524|GO:0006605|GO:0006886
Arst8g00717 1055 PRINTS SecA protein signature 181 191 IPR000185 GO:0005524|GO:0006605|GO:0006886
Arst8g00717 1055 PRINTS SecA protein signature 234 254 IPR000185 GO:0005524|GO:0006605|GO:0006886
Arst8g00717 1055 PRINTS SecA protein signature 461 474 IPR000185 GO:0005524|GO:0006605|GO:0006886
Arst8g00717 1055 PRINTS SecA protein signature 127 151 IPR000185 GO:0005524|GO:0006605|GO:0006886
Arst8g00717 1055 PRINTS SecA protein signature 165 179 IPR000185 GO:0005524|GO:0006605|GO:0006886
Arst8g00717 1055 PRINTS SecA protein signature 387 409 IPR000185 GO:0005524|GO:0006605|GO:0006886
Arst8g00717 1055 Gene3D - 86 463 IPR027417 -
Arst8g00717 1055 FunFam Protein translocase subunit SecA 85 306 - -
Arst8g00717 1055 SUPERFAMILY Pre-protein crosslinking domain of SecA 294 415 IPR036670 GO:0016020|GO:0017038
Arst8g00717 1055 Coils Coil 1052 1055 - -
Arst8g00717 1055 SUPERFAMILY Helical scaffold and wing domains of SecA 775 873 IPR036266 -
Arst8g00717 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 463 IPR027417 -
Arst8g00717 1055 ProSitePatterns SecA family signature. 550 565 IPR020937 GO:0006605|GO:0006886|GO:0016020
Arst8g00717 1055 SMART SecA_DEAD_2 71 450 IPR011115 GO:0005524|GO:0016020|GO:0017038
Arst8g00717 1055 SUPERFAMILY Helical scaffold and wing domains of SecA 942 1052 IPR036266 -
Arst8g00717 1055 FunFam Preprotein translocase SecA subunit 296 416 - -
Arst8g00717 1055 Gene3D Helical scaffold and wing domains of SecA 911 1046 - -
Arst8g00717 1055 ProSiteProfiles SecA family profile. 67 771 IPR014018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00717 Arst-Chr8 10018189 10027597 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00717 K03070 - gmx:100793437 1746.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00717 8 10018189 10027597 Arst8g00717 8 10018189 10027597 ECH