Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00638 ATGAGTCACAGAGGAATGGACGACGATGATGAGGAGGAGTACGAGGAGGACGAGCAGGTAGCCGACTTCGATGAGGAGGCAGAGGAGGAAGAGGACGATAGGGGGCGCGGCAGCGGCGGCAGGAAGCGTCGGAGATCTGATTTCATCGATGATGATGCTGAGGAGGTGGATGAGGATGAGGAGGAGGAGGACGATGACGATGATTATGGGGGTGGTGGCGGCCGCAGGCGCCAGAATAGGAAAGCCTCTGCTTCTCATTTCTTCGATGACATAGCGGAGGTGGATTCAGATGGGGAAGAAGAAGAAGAGGAAGGGGAGGACGATTTCTTTGTTGATAATGGAAATGATATTCCTGAGGACAATGTCAGTAGGAGCAGACTTCATAGGCCTTTGCATGAGCAAGATAATGAAGATTTTGAAGCTTTAGAAAGACACATCCAGGAAAGATATGCAAGGCGTGTGGAATCTTTTGATGAAGAGGCTACAGATGTAGAACAGCAAGCTCTTTTGCCATCTGTTAGAGATCCAAAGCTGTGGATGGTGAAATGTCAGATTGGTCATGAGAGAGAGACAGCTGTTTGCCTTATGCAAAAGTATATAGATAAGGGGGCTGAATTGCAAATCAGGTCAGCTATTGCCCTTGATCATCTTAAAAACTATATTTATGTGGAAGCAGATAAAGAGGCCCACGTGAGAGAGGCTATTAAGGGTTTAAGGAACATATATGGGGCGTCAAAAATAACACTAGTTCCAATAAGAGAAATGACGGATGTGCTGTCAGTTGAAAGCAAAGCAATTGATCTTGCCAGAGATACTTGGGTCAGAATGAAGATTGGCACATATAAAGGGGACCTTGCCAAGGTAGTTGATGTTGATAATGTGAGGCAGAGGGTTACGGTGAAACTGATTCCAAGGATAGACTTGCAGGCGCTTGCAAATAAACTGGAAGGTAGAGAAGTTGTGAAAAAGAAGGCGTTTGTCCCTCCTCCTCGTTTTTTAAATGTTGATGAAGCTAGGGAACTGCATATTCGTGTCGAGCATAGACGTGATGCCTATGGGGAAAGATTTGATGCAATTGGAGGAATGATGTTTAAGGATGGATTCTTGTACAAAACTGTATCAATAAAATCCATTAATGCTCTAAACGTCAAACCTACTTTGAATGAACTTGAAAATTTTCGAAAACCTGGTGAGAGTGGTGACAGCGATGTAGCAAGTCTGTCAACTTTGTTCGCTAACAGAAAGAAAGGCCATTTTATGAAAGGTGATGCTGTAATTGTTGTGAAGGGTGATTTGAAGAAGTTGAAGGGGTGGGTGGAGAAAGTAGATGAAGATAATGTTCATATAAGACCAGAATTGAAGGGTCTTCCTAAAACCCTTGCTGTAAATGAAAGGGAACTTTGTAAATATTTTGAACCTGGAAACCACGTTAAGGTTGTTACTGGTGCTCAAGAGGGTGCTACCGGCATGGTTGTGAAGGTGGAACAGCATGTATTGATTCTATTATCCGACACAACAAAAGAACATATCCGTGTGTTTGCAGATGATGTTGTGGAGAGTTCTGAAGTGACCACTGGAATTACAAAAATTGGGGACTATGAACTTCGTGATCTTGTATTGTTAGATAATATGGACTTTGGTGTAATAGTTCGTGTAGAAAGCGAGGCATTTCAGGTTCTTAAGGGGACTGCAGACAGGCCTGAAGTTGCACTTGTTAAATTAAGAGAGATTAAATGCAAGGTAGAGAAGAAAATAAATGCGCAGGATAAGCATAAGAATACAATCTCAGTAAAGGATGTTGTGCGAGTTGTCGAAGGTCCTTGCCATGGAAAATCTGGTCCTGTGGAGCACATATATAGGGGGTTCTTGTTCATCTATGATCGCCATCATCTTGAACATGCAGGCTTTATATGTGCTAGGGCTTGCTCGTGTTTGGTCGTTGGAGGTTCACGTTCGAGTGGTGACAGAAACGGTGATGCCTACTCGAGATTCCCTGGCCTTAGAACTCCACCTCGTATTCCCCAGTCCCCGAGAAGGTTTTCACGAGGAGGGCCTCCAATTGATTCTTGAGGAAGGCACAGGGGTGGAACAGGACACGATGGTTTGGCTGGTGCAACGGTCAAAGTACGCCAGGGTGCTTATAAAGGTTATTGTGGACGTGTAATAGAAGTTAAAGGCACAACAGTTCGGGTTGAATTGGAGTCCCAAATGAAGGTTGTGACGGTTGATCGCAACCATATATCGGATAATGTAGCTGTAACCCCACAGCGTGAAACTCGATATTCGATTGGATGTGAAACCCCAATGCATCCTTCTCGAACTCCCCTACATCCATATATGACCCCTATGAGAGATCCTGGAGCAACTCCTATACATGATGGAATGAGGACACCAAGGCGTGACCGGGCATGGAATCCTTATACCCCAATGAGTCCAACAAGGGACTGGGAAGATGGAAATCCAGGCTCATGGGGAACCAGCCCACAGTCCCAGGCAGGAAGCTCACCTTCACGGCTATATGAAGCCCCCACTCCTGGTGCTGGTTGGGGTAGCACTCCTGGCGGAAACTATAATGAGGCTGGAACACCGCATGACTCATACGTAAATGTTGCAAGCCCATATTTACCATCAACACCTGGTGGGCAGCCTATGACGCCAAATTCCGCTATGTATCTTCCTAGCACAGTTTTAGGTGGGGACAATGAGGGGCCATGGTTTATGCCAGACATATTAGTTAATGTACACAGGCCAGGTGAAGAATCTGTTGGAGTTATAAGAGAGGTTCTTCCGGATGGGTCTTGCAAGGTAGCGCTTGGCTCAAGTGGAAATGGTGAAACGATAACTGCCCTTCCCAATGAAATGGAGGCCGTGGTGCCAAGGAAATCAGACAAAATAAAGATAATGGGTGGAGCATTGAGGGGGTCTACAGGCAAGTTGATTGGTGTAGATGGTACTGATGGTATTGTAAAGGTAGATGACACATTGGAAGTCAAGATTTTAGACCTAGTTATTTTGGCTAAATTAGCTCAACCATGA 3036 0.4516 MSHRGMDDDDEEEYEEDEQVADFDEEAEEEEDDRGRGSGGRKRRRSDFIDDDAEEVDEDEEEEDDDDDYGGGGGRRRQNRKASASHFFDDIAEVDSDGEEEEEEGEDDFFVDNGNDIPEDNVSRSRLHRPLHEQDNEDFEALERHIQERYARRVESFDEEATDVEQQALLPSVRDPKLWMVKCQIGHERETAVCLMQKYIDKGAELQIRSAIALDHLKNYIYVEADKEAHVREAIKGLRNIYGASKITLVPIREMTDVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVVKKKAFVPPPRFLNVDEARELHIRVEHRRDAYGERFDAIGGMMFKDGFLYKTVSIKSINALNVKPTLNELENFRKPGESGDSDVASLSTLFANRKKGHFMKGDAVIVVKGDLKKLKGWVEKVDEDNVHIRPELKGLPKTLAVNERELCKYFEPGNHVKVVTGAQEGATGMVVKVEQHVLILLSDTTKEHIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNMDFGVIVRVESEAFQVLKGTADRPEVALVKLREIKCKVEKKINAQDKHKNTISVKDVVRVVEGPCHGKSGPVEHIYRGFLFIYDRHHLEHAGFICARACSCLVVGGSRSSGDRNGDAYSRFPGLRTPPRIPQSPRRFSRGGPPIDSXGRHRGGTGHDGLAGATVKVRQGAYKGYCGRVIEVKGTTVRVELESQMKVVTVDRNHISDNVAVTPQRETRYSIGCETPMHPSRTPLHPYMTPMRDPGATPIHDGMRTPRRDRAWNPYTPMSPTRDWEDGNPGSWGTSPQSQAGSSPSRLYEAPTPGAGWGSTPGGNYNEAGTPHDSYVNVASPYLPSTPGGQPMTPNSAMYLPSTVLGGDNEGPWFMPDILVNVHRPGEESVGVIREVLPDGSCKVALGSSGNGETITALPNEMEAVVPRKSDKIKIMGGALRGSTGKLIGVDGTDGIVKVDDTLEVKILDLVILAKLAQP 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00638 1011 MobiDBLite consensus disorder prediction 93 114 - -
Arst8g00638 1011 MobiDBLite consensus disorder prediction 1 143 - -
Arst8g00638 1011 Pfam KOW motif 473 498 IPR005824 -
Arst8g00638 1011 SUPERFAMILY Translation proteins SH3-like domain 462 521 IPR008991 -
Arst8g00638 1011 FunFam Transcription elongation factor SPT5 267 309 - -
Arst8g00638 1011 Gene3D - 413 470 IPR014722 -
Arst8g00638 1011 FunFam Transcription elongation factor SPT5 413 470 - -
Arst8g00638 1011 SMART nusgn_4 175 262 IPR006645 GO:0140673
Arst8g00638 1011 Pfam Early transcription elongation factor of RNA pol II, NGN section 177 259 IPR005100 -
Arst8g00638 1011 FunFam Transcription elongation factor SPT5 473 522 - -
Arst8g00638 1011 Gene3D - 267 309 IPR014722 -
Arst8g00638 1011 FunFam Transcription elongation factor SPT5 157 260 - -
Arst8g00638 1011 SMART kow_9 700 727 IPR005824 -
Arst8g00638 1011 SMART kow_9 418 445 IPR005824 -
Arst8g00638 1011 SMART kow_9 470 497 IPR005824 -
Arst8g00638 1011 SMART kow_9 267 294 IPR005824 -
Arst8g00638 1011 SMART kow_9 958 985 IPR005824 -
Arst8g00638 1011 SMART kow_9 594 621 IPR005824 -
Arst8g00638 1011 MobiDBLite consensus disorder prediction 8 32 - -
Arst8g00638 1011 Gene3D - 473 522 IPR014722 -
Arst8g00638 1011 CDD KOW_Spt5_2 419 469 IPR041975 -
Arst8g00638 1011 Gene3D - 157 260 IPR036735 GO:0006355
Arst8g00638 1011 CDD KOW_Spt5_4 598 640 IPR041977 -
Arst8g00638 1011 MobiDBLite consensus disorder prediction 33 50 - -
Arst8g00638 1011 MobiDBLite consensus disorder prediction 763 887 - -
Arst8g00638 1011 Gene3D - 688 750 IPR014722 -
Arst8g00638 1011 MobiDBLite consensus disorder prediction 820 838 - -
Arst8g00638 1011 CDD KOW_Spt5_1 271 308 IPR041973 -
Arst8g00638 1011 ProSitePatterns Ribosomal protein L24 signature. 422 439 IPR005825 GO:0003735|GO:0005840|GO:0006412
Arst8g00638 1011 PIRSF Spt5 2 1011 IPR017071 GO:0006357|GO:0032784
Arst8g00638 1011 MobiDBLite consensus disorder prediction 119 143 - -
Arst8g00638 1011 PANTHER SUPPRESSOR OF TY 5 30 988 IPR039659 GO:0006357|GO:0032784
Arst8g00638 1011 MobiDBLite consensus disorder prediction 855 887 - -
Arst8g00638 1011 MobiDBLite consensus disorder prediction 51 68 - -
Arst8g00638 1011 CDD KOW_Spt5_3 470 520 IPR041976 -
Arst8g00638 1011 Coils Coil 147 167 - -
Arst8g00638 1011 CDD KOW_Spt5_5 698 748 IPR041978 -
Arst8g00638 1011 Pfam Spt5 transcription elongation factor, acidic N-terminal 87 171 IPR022581 -
Arst8g00638 1011 CDD NGN_Euk 177 260 IPR039385 -
Arst8g00638 1011 CDD KOW_Spt5_6 952 1009 IPR041980 -
Arst8g00638 1011 MobiDBLite consensus disorder prediction 657 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00638 Arst-Chr8 8917284 8924797 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00638 K15172 - gmx:100784916 1589.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00638 8 8917284 8924797 Arst8g00638 8 8917284 8924797 ECH