Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00618 ATGGCAACTTTTGAGTTAGAGAAGCTGCCTCTTACATATACTCATTCACTTTCAGATTCTTCCTCTGCCTATCAACCTTTCCCTTCTCATTCTCACTACCAAAAATATTATCACTACAATCTTGTTATCACTGATAAGGACCAATTCCGTAATTTCCTTCTTGTTTCATTAACAATCATTCTTGCCATCATAGCATTGGTTCTAATCTTGCACTTTTTACCCCATAAGAACAAGCATCAAGGAACTTCAATCAATTTCAAACTCGCAATTAACCATGCTCTAACTTTTTATGATGCACAAAAATCTGGACACTATCCGAAGAACAGCCCAGTGAAATTTCGAGGCGATTCAGGATTAGGCGATGGAAAATCAGCAGATACTGATCTTGTTGGTGGATTCTATGACTCTGGCAATAACATTAAATTTACTTTCACCACAGCTTATACTACAACCTTGTTGAGTTGGAGTGTGATGGAATATCATAGTAAATATGCTGATCTTGGTGAGCTGCAACATGTTAGGGACATAATCAGATGGGGAAGTGACTATCTCCTAAAGGTGTTCATTCTCCCAACTTCATCTAAATCTAACCTTACAATATACTCGCAGGTTGGAAATACCATTAGTGATAAGGGAGAGCCAAAAAATGATATAAGCTGCTGGCAAAGACCTGAAGACATGGATTATGCAAGACCAGTTTCAATTTGTGACAGTTCTGCTTCAGATTTAGGAGGTGAAATTGTTGCAGCATTATCTGCATCATCTATGGTATTAAAAAATGACACAGAATACTCAATGAAACTAGTCAAAGCAGCAGAAACTCTACACAAGTTAGTCACAAGTGAAGATCCAAAGAAGCAAGGAACTTACACAATGGTTGATGCATGTGGAAAACAAGCAAGAGATTTCTACAAATCATCAAGTTACAAAGATGAATTGGCATGGGGAGGAACATGGTTGTTTCTTGCTACTGGAAACTTAACTTACCTTGATTATGCTACTGAGACTTTTAAATCTGCCAAGAACAATGAATCAGATTTTGATAATGGAACCTTTGATTGGAACAACAAGCTCAATGCGCTCGCGGTTTTGCTAACAAGAATTCGATATTTTCGTGATCCTGGAGGATTGTATGAACATGCTTTGAGGCTCTCATCAAACTCAACACACTCCCTCATGTGCTCTTTGCTGTTCAATGATTTTAGCAGGACACCTGGTGGATTGATTATCATGAAAGATGATAATGGGCCATTACTAGAGTATGCTGCAACAGCATCATTCCTCAGTAAATTGTATAGTGATTATCTTCATCATCTCAAGTTCTCTGGTGCAAAATGCAAGAGTAATGTGTTTTCGGTGGCTATGCTTCGCGAATTTGCTAGTTCTCAGGTTAACTACATATTGGGACAGAATCCTTTGAAGATGAGTTACTTAGTGGGACATGGTGACAAATTTCCAGTGCAAGTTCATCACAGAAGTGCATCAATTCCATGGGATGATAAGAAGCATTATAGTTGTGATGGTGGCAAGAAATGGCTCAACTCGAAGGATCCGAATCTGCAAGTTCTTGTTGGAGCCATGGTGGGAGGGCCAGACATGCATGATGGTTTCATAGATCAAAGGAACAATTCAAGGTTCACTGAGCCAAACATAGCAAGCAATGCTGGTTTAGTTGCAGCACTTATTGCACTTTCTGATAACTCAAGTGGCTTGAAAGATTCATTTTGA 1728 0.3883 MATFELEKLPLTYTHSLSDSSSAYQPFPSHSHYQKYYHYNLVITDKDQFRNFLLVSLTIILAIIALVLILHFLPHKNKHQGTSINFKLAINHALTFYDAQKSGHYPKNSPVKFRGDSGLGDGKSADTDLVGGFYDSGNNIKFTFTTAYTTTLLSWSVMEYHSKYADLGELQHVRDIIRWGSDYLLKVFILPTSSKSNLTIYSQVGNTISDKGEPKNDISCWQRPEDMDYARPVSICDSSASDLGGEIVAALSASSMVLKNDTEYSMKLVKAAETLHKLVTSEDPKKQGTYTMVDACGKQARDFYKSSSYKDELAWGGTWLFLATGNLTYLDYATETFKSAKNNESDFDNGTFDWNNKLNALAVLLTRIRYFRDPGGLYEHALRLSSNSTHSLMCSLLFNDFSRTPGGLIIMKDDNGPLLEYAATASFLSKLYSDYLHHLKFSGAKCKSNVFSVAMLREFASSQVNYILGQNPLKMSYLVGHGDKFPVQVHHRSASIPWDDKKHYSCDGGKKWLNSKDPNLQVLVGAMVGGPDMHDGFIDQRNNSRFTEPNIASNAGLVAALIALSDNSSGLKDSF 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00618 575 Gene3D - 82 568 IPR012341 GO:0005975
Arst8g00618 575 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 466 492 IPR018221 -
Arst8g00618 575 PANTHER ENDO-1,4-BETA-GLUCANASE 60 567 - -
Arst8g00618 575 Pfam Glycosyl hydrolase family 9 88 561 IPR001701 GO:0004553|GO:0005975
Arst8g00618 575 SUPERFAMILY Six-hairpin glycosidases 84 566 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00618 Arst-Chr8 8678428 8680883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00618 14 565 Glycoside Hydrolase AT5G49720 43.972 9.19e-141 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00618 K01179 - gmx:100805472 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00618 8 8678428 8680883 Arst8g00618 8 8678428 8680883 ECH