Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00528 ATGGGATGCAAGTATTCAAAGAAAGTCATAAATAAAGTACCGGGTTACGAGGAACCCATTGTTCTTGCTTCTCAGACACCTTTTAATGTGAGTGAAGTTGAGGCCTTATATGAGCTTTACAAGAAGTTGAGCAATTCAATTATTGCAGATGGTCTTATTCACAGGGAAGAATTCCAACTTGCACTCTTCAGGAATAAAAACAAGAGAAATCTGTTTGCGGACAGGATTTTTGATCTATTTGATATCAAGAAAAATGGGGTCATTGAGTTTGGAGAATTTGTTCGATCATTGGGTGTATTTCACCCAGATGCATCTATGGAAGACAAGATTAAATTTGCTTTTAGGTTATATGATCTAAGGCAGACAGGGTATATTGAACGTGAAGAGTTGAAGGAGATGGTGTTGGCACTTCTACACGAGTCTGATCTTGTGCTTTCAGATGATATCGTGGAATCCATCGTGGATAAGACTTTTAGTGATGCTGATACAAAAGGTGATGGAAGGATTGATCAGGATGAGTGGAAAGCATTTGTGTCTAAGCATCCATCCTTGATAAAGAACATGACTCTACCATATCTAAAGGATATAACCTTAGCATTTCCCAGTTTTGTTGTAAATTCAGATGTTGATGATGCAGATGTATGTGTATGA 651 0.3763 MGCKYSKKVINKVPGYEEPIVLASQTPFNVSEVEALYELYKKLSNSIIADGLIHREEFQLALFRNKNKRNLFADRIFDLFDIKKNGVIEFGEFVRSLGVFHPDASMEDKIKFAFRLYDLRQTGYIEREELKEMVLALLHESDLVLSDDIVESIVDKTFSDADTKGDGRIDQDEWKAFVSKHPSLIKNMTLPYLKDITLAFPSFVVNSDVDDADVCV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00528 216 PRINTS Recoverin family signature 123 141 - -
Arst8g00528 216 PRINTS Recoverin family signature 169 189 - -
Arst8g00528 216 PRINTS Recoverin family signature 76 97 - -
Arst8g00528 216 ProSiteProfiles EF-hand calcium-binding domain profile. 68 103 IPR002048 GO:0005509
Arst8g00528 216 PANTHER CALCINEURIN B 3 211 IPR045198 GO:0005509|GO:0019722|GO:0019900
Arst8g00528 216 ProSiteProfiles EF-hand calcium-binding domain profile. 149 184 IPR002048 GO:0005509
Arst8g00528 216 CDD EFh 109 179 IPR002048 GO:0005509
Arst8g00528 216 SMART efh_1 72 100 IPR002048 GO:0005509
Arst8g00528 216 SMART efh_1 153 181 IPR002048 GO:0005509
Arst8g00528 216 SMART efh_1 109 137 IPR002048 GO:0005509
Arst8g00528 216 ProSiteProfiles EF-hand calcium-binding domain profile. 105 140 IPR002048 GO:0005509
Arst8g00528 216 Pfam EF-hand domain pair 50 95 IPR002048 GO:0005509
Arst8g00528 216 Pfam EF-hand domain pair 107 177 IPR002048 GO:0005509
Arst8g00528 216 Gene3D - 19 212 - -
Arst8g00528 216 FunFam calcineurin B-like protein 3 18 211 - -
Arst8g00528 216 SUPERFAMILY EF-hand 23 203 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00528 Arst-Chr8 7454205 7458572 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00528 26 214 EF-hand Containing Proteins AT5G24270 73.016 1.63e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00528 K06268 - mnt:21390233 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00528 8 7454205 7458572 Arst8g00528 8 7454205 7458572 ECH