Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00513 ATGCCAACACCAGCTTTCACTTTCTACTCTACAATGTCAGCTTCAGCTTCGTTTCTTGCTCCGTCCCCCTCTTTCGCTCCATTCAGGGGTTGCAAAGAGGTTCCACGTATGTTTTCAGTGTCTAACAAAAAGGAGAATCGCACTTCAAAGCTTTACATTATACCCATCACCACTGTTACTCGCTTTTGTGCCTCAACAGCTTCACTTGAGTCCTTGCACTTTGCTGACACTAATGCTAATCAAAATCACAGAATAAACGAATTTGAGAATGAGTTGAACGAGTTCTTTGATGAAGTGAAAACAATGATTAGAATGGGAAAAAGAGATGATGCTCTTGACCTACTTAATGCCGGCTCTAAAGGCATTCAAGAAGCTGCAATTCTGGATGTCTTAGCGCTGGGTTATGTGGCTGTTGGAGACCTAGAAACTGTTGCTTCTCTGTTGAATGTGATGAGAAAAGTGATTGACAATTTGAAGGATGACACACAACATCTAGATTTGATACTTACGCATATGGGAAGTATGTATTCAACATTGAGCAAGTTTGGAAAATCACTGGACACGTATCAAAGGGCTTTCAACATTATGGAAAGGACCTATGGTAACGACAGCCCTTTTCTTGTCACACCCTATTTGGCTATGGCAAAGGTTCTTGGTTCAACTGGAAAAGCAACAAAAGCCATAGAGAAATACCAGTGTGCAATAACTATTTTGGAGTCTAAGAGAGGTGCTGAAAGTAAGGATTTGGTTGTACCTTTACTTGGTCTTGGCAATCTTTTACTGAAAGAAAGAAGAGTCAACGATGCAGAAACTCATTTTACTAGGGTTCTCGACATATACACAAAGTCATATGGACAAAATGATGGAAGAATTGGATTGGCCATGAGTTCCCTTGCCCAAGTTAAGTGTGCTCAAGGGAAGTCAGATGAAGCAATCAATTTGTATGAACATGCACTTCATGTCATGAAAGATTCCAATTACTTGTCGCCAGATGACAGCATCATGGAAAAGATGAGGGTAGATCTTGCTGAGTTGCTTCATGCTGTCGGGAGAGAGGCACAAAGGAAAAGGTCACCCCGGCTTAGTGACACACATGATAAATCTTGCAACTTCATATTCCCAATCGAAGAATTATGCAGAGGCCGAGCACTTGTTGAGAAGAGTTTGGAAATAATGATAAAGCAGAAAGGAAGCGATGACCAGTTCGTCAGCTTTCCAATGTTGCAACTTGCAGTTACGCTTCACCATTTGAAACAAGATGAAGAAGCTGAGAAACTGGCACTGGATGCTTTGCGCATCCGTGAGAAGGCATTTGGAGAAGATTCTCTTCCAGTTGGGGAGGCTTTTGACTGTTTGGTGTCTATTCAAACTCAAGTTGGTAAAGATGAGAGCGAGTTAGTTGTGCTACTTAGAAGGATTCTAGGTATACAAGAGAGAGAATTTGGATACGAGAGTGAGGAAGTTTTGGTTACAGTGAAAAAGATTGTATTCTTGTTGGATAAACTAGGGAGAAGAGATGAAATGCTTCCCTTGCAGAGGAGGTTGTCTCTGCTTAGAAAGAAGTATAAGCAGATGATTCATCACTGA 1587 0.4127 MPTPAFTFYSTMSASASFLAPSPSFAPFRGCKEVPRMFSVSNKKENRTSKLYIIPITTVTRFCASTASLESLHFADTNANQNHRINEFENELNEFFDEVKTMIRMGKRDDALDLLNAGSKGIQEAAILDVLALGYVAVGDLETVASLLNVMRKVIDNLKDDTQHLDLILTHMGSMYSTLSKFGKSLDTYQRAFNIMERTYGNDSPFLVTPYLAMAKVLGSTGKATKAIEKYQCAITILESKRGAESKDLVVPLLGLGNLLLKERRVNDAETHFTRVLDIYTKSYGQNDGRIGLAMSSLAQVKCAQGKSDEAINLYEHALHVMKDSNYLSPDDSIMEKMRVDLAELLHAVGREAQRKRSPRLSDTHDKSCNFIFPIEELCRGRALVEKSLEIMIKQKGSDDQFVSFPMLQLAVTLHHLKQDEEAEKLALDALRIREKAFGEDSLPVGEAFDCLVSIQTQVGKDESELVVLLRRILGIQEREFGYESEEVLVTVKKIVFLLDKLGRRDEMLPLQRRLSLLRKKYKQMIHH 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00513 528 SUPERFAMILY TPR-like 122 237 IPR011990 GO:0005515
Arst8g00513 528 Pfam Tetratricopeptide repeat 408 442 - -
Arst8g00513 528 Coils Coil 78 105 - -
Arst8g00513 528 Pfam Tetratricopeptide repeat 168 240 - -
Arst8g00513 528 Pfam Tetratricopeptide repeat 254 321 - -
Arst8g00513 528 Gene3D Tetratricopeptide repeat domain 378 528 IPR011990 GO:0005515
Arst8g00513 528 SUPERFAMILY TPR-like 211 351 IPR011990 GO:0005515
Arst8g00513 528 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 82 488 - -
Arst8g00513 528 Gene3D Tetratricopeptide repeat domain 89 369 IPR011990 GO:0005515
Arst8g00513 528 SMART tpr_5 250 283 IPR019734 GO:0005515
Arst8g00513 528 SMART tpr_5 292 325 IPR019734 GO:0005515
Arst8g00513 528 SMART tpr_5 404 437 IPR019734 GO:0005515
Arst8g00513 528 SMART tpr_5 208 241 IPR019734 GO:0005515
Arst8g00513 528 SMART tpr_5 166 199 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00513 Arst-Chr8 7270976 7274891 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00513 - - aprc:113852595 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00513 8 7270976 7274891 Arst8g00513 8 7270976 7274891 ECH