Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00342 ATGGTTCTTTCGAAGAAGATACATATGATTTTGAAAATATTTTTTCTTTCCAGAGCTGAAGCTTTAGAGAAGATGAGTTTCTTCAGTACCATTTTTGGGTTTTTCGGTTTCGGAATTGGAATTTCATTTGGCCTCGTCGCCGGCTATTTTCTCTTCATTTACTCTGAATCCGCCGATGTTAAGGATCCTGAGATCCAACCACTAGCGAATCAAGACTCAGAAACTCTCCAACGAATAATTCCTGAGATTCCACTTTGGATTAAAAATCCAGACTTCGATCGGGTTGACTGGCTTAACAGGCTTATCGAATACATGTGGCCCTATCTTGACAAGGCAATATGCAAGACCGCAGAGGGCATTGTGAAACCCATGATTGCAGAGCAGATTCCCAACTATAAAATTGATTCTGTAGAGTTTGAAGTGCTCACTCTCGGCAGCCTGCCCCCTACTTTTCAAGGGATGAAAGTTTATATAACTGATGAGAAGGAGTTAATTATGGAACCAAGTATCAAATGGGCTGGAAATCCTAATGTCACCGTCGCAGTTAAGGCATTTGGCTTGAAACCAACCATTCAAGTGGTGGATTTGCAAGTTTTTCTTGCACCTCGTGTCACTTTGAAACCTTTGGTTCCAAGCTTTCCTTGTTTTGCCAACATCTTTGTGTCTCTCATGGAAAAGCCACATGTTGACTTCGGACTAAAGCTTGTAGGGATTGATCTTATGTCTATTCCTGGTCTCTACAGGTTTGTTCAGGAGCTTATCAAAGATCAGGTTGCGAATATGTATTTATGGCCCAAAACCCTCGACGTTCAAATCATGGATCCGGCAAAAGCAATGAGGAGGGCTATTGGAATTTTAGTTGTAAAAGTAGTGAGAGCAATGAAGCTAAAGAAGAAAGATCTTCTTGGTGCATCTGACCCTTATGTGAAGATAAAGCTTTCTGGGGACAATATGCCAGCGAAAAAGACAACGGTGAAGCACAAGAACTTGAACCCAGAATGGAATGAAGAATTTAATTTGCTAGTGAAGGATCCAGAAACACAGACACTAGAGTTTGAAGTGTATGACTGGGAGCAGGTCGGGAGGCATGATTTTATGGGTACGAATGTGGTGGCTCTGAAAGAGTTGAAAGAGGAAGAAACAAAGGTTGTAACACTGGATCTGCTGAAGAACATGGATTCGAATGATGCGGCAAATGACAAGTCCCGAGGTCAGATAGTTATGGAATTAACATATAAGGCTTTCAAGGAGGAAGAGATGGGGAAAGGGTTTGAAGAGACAGAGATGATGATGATGGATAAAGCTCCAGAAGGGACTCCTCCAGGTGGAGGATTGCTTGTAGTTGTAGTCCATGAGGCACAAGACGTGGAAGGAAAGTACCACACGAATCCACAAGTACGCCTCATTTTCAGGGGAGAGGAGAGGAAAACCAAACACGTGAAGAAGAACAGAGACCCACGGTGGGAAGAGGAGTTCCAGTTTGTGGTGGAGGAGCCTCCCACTAACGACAAATTACATGTGGAGGTTGTTAGCACTTCTTCCCGTAATTTGCTTCGTCAGAAGGAGTCTCTCGGTTACGCTGACATCTCTCTTGCTGATGTTGTTACTAACAAGAGAATCAATGAGAGATATCATCTCATAGATTCCAAGAATGGTCGCCTTCAGATTGAGCTCATGTGGAGACCTTCTCAGCCCGCCACTTGA 1704 0.4319 MVLSKKIHMILKIFFLSRAEALEKMSFFSTIFGFFGFGIGISFGLVAGYFLFIYSESADVKDPEIQPLANQDSETLQRIIPEIPLWIKNPDFDRVDWLNRLIEYMWPYLDKAICKTAEGIVKPMIAEQIPNYKIDSVEFEVLTLGSLPPTFQGMKVYITDEKELIMEPSIKWAGNPNVTVAVKAFGLKPTIQVVDLQVFLAPRVTLKPLVPSFPCFANIFVSLMEKPHVDFGLKLVGIDLMSIPGLYRFVQELIKDQVANMYLWPKTLDVQIMDPAKAMRRAIGILVVKVVRAMKLKKKDLLGASDPYVKIKLSGDNMPAKKTTVKHKNLNPEWNEEFNLLVKDPETQTLEFEVYDWEQVGRHDFMGTNVVALKELKEEETKVVTLDLLKNMDSNDAANDKSRGQIVMELTYKAFKEEEMGKGFEETEMMMMDKAPEGTPPGGGLLVVVVHEAQDVEGKYHTNPQVRLIFRGEERKTKHVKKNRDPRWEEEFQFVVEEPPTNDKLHVEVVSTSSRNLLRQKESLGYADISLADVVTNKRINERYHLIDSKNGRLQIELMWRPSQPAT 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00342 567 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 28 560 IPR045050 GO:0008289
Arst8g00342 567 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 91 271 IPR039010 -
Arst8g00342 567 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 281 415 IPR035892 -
Arst8g00342 567 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 444 562 IPR035892 -
Arst8g00342 567 ProSiteProfiles C2 domain profile. 426 544 IPR000008 -
Arst8g00342 567 CDD C2 286 388 - -
Arst8g00342 567 Gene3D C2 domain 279 437 IPR035892 -
Arst8g00342 567 SMART C2_3c 445 543 IPR000008 -
Arst8g00342 567 SMART C2_3c 285 385 IPR000008 -
Arst8g00342 567 ProSiteProfiles C2 domain profile. 264 386 IPR000008 -
Arst8g00342 567 CDD SMP_SYT 84 272 - -
Arst8g00342 567 FunFam Extended synaptotagmin-2 445 562 - -
Arst8g00342 567 Pfam C2 domain 445 546 IPR000008 -
Arst8g00342 567 Pfam C2 domain 284 382 IPR000008 -
Arst8g00342 567 FunFam Synaptotagmin-2 isoform A 279 436 - -
Arst8g00342 567 Gene3D C2 domain 445 563 IPR035892 -
Arst8g00342 567 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 91 273 IPR031468 GO:0008289
Arst8g00342 567 PRINTS C2 domain signature 301 313 IPR000008 -
Arst8g00342 567 PRINTS C2 domain signature 350 358 IPR000008 -
Arst8g00342 567 PRINTS C2 domain signature 328 341 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00342 Arst-Chr8 4865405 4868309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00342 286 542 Lipid Metabolism Gene Families AT3G61300 27.037 3.65e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00342 - - qsa:O6P43_002118 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00342 8 4865405 4868309 Arst8g00342 8 4865405 4868309 ECH