Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00311 ATGGCCACCAACTCTCCCGCCACAGCTCCGCCTCCACCCAAACCGGGTGACCCTCCTTCTTCCTCCACCGAAACCACACCGCCCCCTCCCAAGCAACCACCACAGCCCTCACCTTCTCCGGCGAAGCCCGAAGCCCCATTGTCCGACTCAAAACCCTCCACAGAAGCCACCGTCGTGCTGGTCCCCAGCCACTCCAGATGGTTCTCCTTACATTCCATTCACCAATGCGAGGTCCGCCATCTCCCCGAGTTCTTCGACTCCCCCTCTTCCTCCTCCAAGAACCCTAGGGTTTACAAGTACTACAGGAACTCCATAGTCAAGTACTTCCGTTACAACCCTTCCCGAAAAATCACCTTCACCGACGTCAGAAAAACCCTCGTCGGTGACGTCGGTTCCATCCGCAGAGTCTTCGATTTCCTCGAAGCATGGGGATTGATCAATTACCTTCCGTCTTCGTCCATGAACAAGCCCTTGAAGTGGGACGACAAAGAGTCCAAATCCGAATCTGGATCCAACACTGCCGAACCCCCACAACCTGTTCGAGAAAACACCAAGAGAATCTGCAGCGGATGCAAAGCCGTTTGCACCATTGCTTGCTTTGCTTGTGATAAGTATGATTTGACTCTGTGTGCGAGATGCTATGTTCGTGGGAATTATAGAGTGGGTGTGAGTTCTTCGGATTTTAGGCGAGTTGAGATAAGCGAAGAGACTAAGACGGATTGGAGTGAGAAGGAGACTCTGAATCTTCTGGAAGCCGTTACACATTATGGTGATGACTGGAAGAGAGTTTCCCAGCATGTTGGTGGCAGGACAGAGAAGGACTGCGTTGCTCATTTCATCAAGCTTCCTTTTGGGGACCAGTTCCTGCGTTATCGAGATGGTGGTGCGACTGACGACACTGCAAATCAGCTGAGGCAGAATGCTGCTGTAGCCGAATTCGATTCAGAAGCTGGTGGTGCAGCCGAGCATAGTAAAAGAATGCGACTCACCCCTCTTGCCGATGCAAGCAACCCTATTATGGCTCAGGCTGCTTTTCTGTCAGCTCTGGCTGGATCAGAGGTTGCATATTCTGCTGCACAAGCTGCAGTGGCAACTCTCTCGGAGGCTTACAAAACAACTAAAAATCATCGATCATTCCCAAGAAACACATCACTACAAGAAGCTGGTATTGCATCTAATGGTGGTACCTCTTCAGATTCATCACAAGCATCTCGATTTCATGCAAATATACTGCTCGAAAAAGAAGAGTTAGATGTGGAAAAGGCAATTTCTGAGATTATTGAAGTTCAGATGAAAAATATCCAAGACAAGCTTCTTCGTTTTGAGAATTCAGACTTGATGATAGAGAAAGAATGCCAGCAGTTGGAGCAAATGAAGAACTTGCTTTTCCTTGATCAGCTTTCTCTTTTATTTCAAAAGCAATCTGCTTCAAAATCTGGAGAACGCACAGAAGGCAATGGTGTAAAGACAAATTGA 1476 0.4844 MATNSPATAPPPPKPGDPPSSSTETTPPPPKQPPQPSPSPAKPEAPLSDSKPSTEATVVLVPSHSRWFSLHSIHQCEVRHLPEFFDSPSSSSKNPRVYKYYRNSIVKYFRYNPSRKITFTDVRKTLVGDVGSIRRVFDFLEAWGLINYLPSSSMNKPLKWDDKESKSESGSNTAEPPQPVRENTKRICSGCKAVCTIACFACDKYDLTLCARCYVRGNYRVGVSSSDFRRVEISEETKTDWSEKETLNLLEAVTHYGDDWKRVSQHVGGRTEKDCVAHFIKLPFGDQFLRYRDGGATDDTANQLRQNAAVAEFDSEAGGAAEHSKRMRLTPLADASNPIMAQAAFLSALAGSEVAYSAAQAAVATLSEAYKTTKNHRSFPRNTSLQEAGIASNGGTSSDSSQASRFHANILLEKEELDVEKAISEIIEVQMKNIQDKLLRFENSDLMIEKECQQLEQMKNLLFLDQLSLLFQKQSASKSGERTEGNGVKTN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00311 491 FunFam SWI/SNF complex subunit SMARCC2 isoform C 236 287 - -
Arst8g00311 491 ProSiteProfiles Myb-like domain profile. 233 283 IPR001005 -
Arst8g00311 491 PANTHER SWI/SNF COMPLEX-RELATED 33 469 - -
Arst8g00311 491 Gene3D - 65 151 IPR036388 -
Arst8g00311 491 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 238 282 IPR017930 -
Arst8g00311 491 Gene3D - 236 286 - -
Arst8g00311 491 SUPERFAMILY Homeodomain-like 55 153 IPR009057 -
Arst8g00311 491 MobiDBLite consensus disorder prediction 1 56 - -
Arst8g00311 491 Pfam SWIRM-associated region 1 407 476 IPR032451 -
Arst8g00311 491 CDD SANT 241 282 IPR001005 -
Arst8g00311 491 Pfam SWIRM domain 62 148 IPR007526 GO:0005515
Arst8g00311 491 SUPERFAMILY Homeodomain-like 237 287 IPR009057 -
Arst8g00311 491 SMART sant 237 285 IPR001005 -
Arst8g00311 491 MobiDBLite consensus disorder prediction 1 45 - -
Arst8g00311 491 FunFam SWI/SNF complex subunit SMARCC2 isoform c 65 153 - -
Arst8g00311 491 ProSiteProfiles SWIRM domain profile. 59 157 IPR007526 GO:0005515
Arst8g00311 491 MobiDBLite consensus disorder prediction 160 182 - -
Arst8g00311 491 Pfam Myb-like DNA-binding domain 239 282 IPR001005 -
Arst8g00311 491 Coils Coil 412 432 - -
Arst8g00311 491 ProSiteProfiles SANT domain profile. 236 287 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00311 Arst-Chr8 4434920 4437368 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00311 188 279 EF-hand Containing Proteins AT3G07740 33.333 3.18e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00311 K11649 - gmx:100779777 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00311 8 4434920 4437368 Arst8g00311 8 4434920 4437368 ECH