Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00288 ATGGGCAGCTACCACCCTCCACTTTCAATAGAGCCAGTGGTGTTGCTGCTTTTGACGCTGCTCATGGTTCCAGTTTCAGTTACGGGAGTGGGCATCAACTATGGCACGCTGGGTAACAACCTTCCATCACCAAAGAAAGTAGCACAGCTTCTTCAGTCAACACTCATCGACAAGGTTAAGATCTATGACTCTAACCCTGAAATCCTCCAAGCTTTCTCCAACACCGCCATTGACCTCATTGTCTCCCTCGAGAACTCCCGCGTAGCCAACATCAGCTCTGACATCTCCGCTGCACACTCTTGGCTCTCCACCCGCATCCTCCCCTTCCTGCCCGCCACCTCCGTCGTCGCCATCGCCGTCGGCAACGAGTACCTCACCACCACCGTTGACAACAACGACGACCACCTCGACGCCAACGCATTGTTCAAAGCCATGCAGAATCTCCACTCCGTACTCGCCTCCCACGGCCTCGACCGCAAAATTAAGGTGACAACGCCGCACAGCATGGCGGTTCTCGCTTCTTCCTTCCCTCCTTCCTCCGCCACCTTCGCCATGAACCTCGTTCCAGTAATGACCGACATTGTTACCTTCTTAGCCGATACCGGTGCTCCCTTCATGATCAACGCTTACCCTTACTTCGCTTACAGAGACAACCCTACCTCCGTGAACCTCGACTACGCTCTTCTCGGTAACGCTTCCGGGGTTCACGATCCAAAAGGCTACGTCTACAGCAACATGCTGGACGCGCAGATGGATGCTGTGAGATCCGCCATTGATGCTCTAGGGTTTGGAAACAGAAGCTTGGAAATAACGGTTTCAGAGTCAGGTTGGCCTTCGAAGGGTGACAACGCTGCTACTCCTCAGAACGCGAAGATCTACAACACGAGGTTGATAGAACGCGCGCAGAGTAACAAAGGAACACCGATGAAGCCTAAGGACCGAATCGAGATCTTCGTGTTCGCACTGTTCAACGAGAACAAGAAGGAAGGTGACGAGAGTGACAGAAACTTCGGGATTTTCAACGGGGATGGATCTAAAGTGTATGAGGTTGATTTGAGTTGTGAGTTTTGCAGCGGAACGACGTCGTTTGGGTTCAGCGAGAAAAATGGTTTAAGTGGTGGTGGTGGTGTCAGGGGTCCTTCGGTTTGGTGTGTTGCGAAGCCTCATGCGGATGATAAAGTTCTTCAGAGCGTTTTGGACTTTTGCTGTGGGCCCGGCGGTGTTTATTGTAGAGAGGTTTATGAAGGTGGTAACTGCTTTCAGCCAAACAAGCTTCTTGCTCACGCCTCCTTTGCTATGAATGCTTATTACCAGATGCATGGTAGAAACTACTGGAATTGCGACTTCAAGGGCACTGGCCTTGTTACCTTCAGCGACCCTAGTTATGGTGAGTGCCGGTATCCTCAACAGTAA 1413 0.5166 MGSYHPPLSIEPVVLLLLTLLMVPVSVTGVGINYGTLGNNLPSPKKVAQLLQSTLIDKVKIYDSNPEILQAFSNTAIDLIVSLENSRVANISSDISAAHSWLSTRILPFLPATSVVAIAVGNEYLTTTVDNNDDHLDANALFKAMQNLHSVLASHGLDRKIKVTTPHSMAVLASSFPPSSATFAMNLVPVMTDIVTFLADTGAPFMINAYPYFAYRDNPTSVNLDYALLGNASGVHDPKGYVYSNMLDAQMDAVRSAIDALGFGNRSLEITVSESGWPSKGDNAATPQNAKIYNTRLIERAQSNKGTPMKPKDRIEIFVFALFNENKKEGDESDRNFGIFNGDGSKVYEVDLSCEFCSGTTSFGFSEKNGLSGGGGVRGPSVWCVAKPHADDKVLQSVLDFCCGPGGVYCREVYEGGNCFQPNKLLAHASFAMNAYYQMHGRNYWNCDFKGTGLVTFSDPSYGECRYPQQ 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00288 470 FunFam Glucan endo-1,3-beta-glucosidase 14 28 356 - -
Arst8g00288 470 Gene3D - 379 467 - -
Arst8g00288 470 FunFam glucan endo-1,3-beta-glucosidase 7 378 468 - -
Arst8g00288 470 Pfam Glycosyl hydrolases family 17 30 351 IPR000490 GO:0004553|GO:0005975
Arst8g00288 470 Pfam X8 domain 383 453 IPR012946 -
Arst8g00288 470 SUPERFAMILY (Trans)glycosidases 30 350 IPR017853 -
Arst8g00288 470 Gene3D Glycosidases 29 358 - -
Arst8g00288 470 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 456 IPR044965 GO:0004553|GO:0005975
Arst8g00288 470 SMART X8_cls 382 467 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00288 Arst-Chr8 4184639 4186384 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00288 30 468 Glycoside Hydrolase AT4G26830 39.865 1.76e-114 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00288 - - aip:107609608 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00288 8 4184639 4186384 Arst8g00288 8 4184639 4186384 ECH