Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00281 ATGTTTTCTGAAGGATTGGGGGCAGACGAATCCCTTTGTCAAGATGTCCAGAGTTTGAGCGTGTCCAAGCGTCTTGTGAGGAGTGTCAGCCAGAAGCTGAGAAAGAAGAATAACAGAAGTGCGGGGGAAGAAGATGATGATCTGAAGGGTGTTGCTTTGAGATGCCTAACTCTGTACAGTCGAGGTGGGGGCTGCAAGGTAGGCGCCGACACCAGTGATGAATTCAGTGATTCAAATGGTAGGAGGAGATCGAGTGCCAGTGAAGAGGGTAGGGGATATAAACCTATTTGTGGCCCTGAAGAAACTGCCGTGGATTGTTTCTCGTATGGGGTGAGGGACATATTTTGGCGGAGACACTCTAGAAAGAATTCTGAAATTGAAGAATTGGCTGCAAATACTAGAATGCATATCTTTCTCCCGGACGATGTTCTGGAAATGTGTTTGGTCCGGCTCCCGTTGACAAGTCTCATGAATGCTCGCCTTGTGTGCAAGAAATGGAGGGCATTGACTACCACTCCTAGATTCCTCCAAATGAGAAGAGAGGGTTCATATCAAAATCCATGGCTGTTTCTGTTTGGTGCAGTTAAAGATGGCTTTTGCTCTGGGGAGATACATGCATTGGATGTGTCTATGAATCAATGGCATAGGATAGATGCCGAATACCTAAGGGGAAGGTTCTTGTTCTCTGTTGCCAGTATACAGGATGATATCTTCATTGTTGGAGGATGTTCTAGCTTGACCAGCTTTGGGAGGGTGGATAGGAGCTCATTCAAGACGCACAAAGGGGTGGTCGTATTTAGTCCCTTGACGAAGTCTTGGCGTAAAATACCATCTATGAAATATGGAAGATCAGTTCCTATATTAGGAGTTTCTGAGGTCAGTTCAGATTTCCCAACATGTCAAGGTCATCAAAGCCGGCAGGATAGACGTCCAAGATCAAGGATCGGTGGGGTGTCGGACGTCTACGAGGATCCTCATAAGCTCTCAATGAGACGTCATTGCAGATCTTCTTTCAATGAGAGTGAAGCTTCATCTGTTACCAGTAGAAGGACATACAAATTCCTTAGACAAAAGAGTGATCATTCAAGTTCAAAGGGAAGTAGAAGAGTTTTGCTGATAGCTGTAGGAGGTCTGGGATCATGGGACGAGCCTCTGGACTCTGGAGAAATATATGATTCTGTATCAAATAAATGGACTGAAATCCAGCGATTGCCTTTTGATTTTGGGGTTGCATGTTCTGGAATTGTTTGTGGCAAGATGTTTTATGTTTATTCCGAGACGGACAAGCTTGCGGCTTATGATGTTGAACGGGGATTCTGGATATCAATTCAAACCTCTCCATTTCCGCCGCGTGTTCTTGAATACTACCCCAAACTTGTATCTTCCGATGGCCGTCTTTTCATGCTATCTGTGTCCTGGTGTGAAGGGGATGGTCAAATCGGGCGCCGGAACAAGGCTGTTAGAAAATTATGGGAGTTAGATCTCATGTATCTTACCTGGACTGAAGTCTCAGTGCATCCTGATGCCCCAATGGATTGGAATGCAGTATTTGTGGCAGACAAAAGCCTTATTTTTGGGATAGAGATGTTCAAGATATTTGGTCAGGTGTTGGATTTTTTCACTGTATGTGATGTGTCTGATATGGCACGCTGGCACCATATTTCAAGGAATCATGTCACTCATGAGCTGGATGCTTCTTCTTGCTTGACCAAAACTGTGGCAGTGCTACATCTTTGA 1737 0.4496 MFSEGLGADESLCQDVQSLSVSKRLVRSVSQKLRKKNNRSAGEEDDDLKGVALRCLTLYSRGGGCKVGADTSDEFSDSNGRRRSSASEEGRGYKPICGPEETAVDCFSYGVRDIFWRRHSRKNSEIEELAANTRMHIFLPDDVLEMCLVRLPLTSLMNARLVCKKWRALTTTPRFLQMRREGSYQNPWLFLFGAVKDGFCSGEIHALDVSMNQWHRIDAEYLRGRFLFSVASIQDDIFIVGGCSSLTSFGRVDRSSFKTHKGVVVFSPLTKSWRKIPSMKYGRSVPILGVSEVSSDFPTCQGHQSRQDRRPRSRIGGVSDVYEDPHKLSMRRHCRSSFNESEASSVTSRRTYKFLRQKSDHSSSKGSRRVLLIAVGGLGSWDEPLDSGEIYDSVSNKWTEIQRLPFDFGVACSGIVCGKMFYVYSETDKLAAYDVERGFWISIQTSPFPPRVLEYYPKLVSSDGRLFMLSVSWCEGDGQIGRRNKAVRKLWELDLMYLTWTEVSVHPDAPMDWNAVFVADKSLIFGIEMFKIFGQVLDFFTVCDVSDMARWHHISRNHVTHELDASSCLTKTVAVLHL 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00281 578 MobiDBLite consensus disorder prediction 303 317 - -
Arst8g00281 578 ProSiteProfiles F-box domain profile. 133 179 IPR001810 GO:0005515
Arst8g00281 578 FunFam F-box/kelch-repeat protein isoform A 152 300 - -
Arst8g00281 578 Gene3D - 345 564 IPR015915 GO:0005515
Arst8g00281 578 SMART kelc_smart 371 418 IPR006652 GO:0005515
Arst8g00281 578 SMART kelc_smart 236 293 IPR006652 GO:0005515
Arst8g00281 578 CDD F-box_AtFBW1-like 138 175 - -
Arst8g00281 578 Gene3D - 152 306 IPR015915 GO:0005515
Arst8g00281 578 Pfam Kelch motif 372 403 IPR006652 GO:0005515
Arst8g00281 578 SMART fbox_2 139 179 IPR001810 GO:0005515
Arst8g00281 578 PANTHER OS09G0555300 PROTEIN 1 578 - -
Arst8g00281 578 SUPERFAMILY F-box domain 138 201 IPR036047 GO:0005515
Arst8g00281 578 Pfam F-box domain 139 175 IPR001810 GO:0005515
Arst8g00281 578 MobiDBLite consensus disorder prediction 72 94 - -
Arst8g00281 578 MobiDBLite consensus disorder prediction 75 89 - -
Arst8g00281 578 MobiDBLite consensus disorder prediction 298 317 - -
Arst8g00281 578 Pfam Kelch motif 227 283 - -
Arst8g00281 578 SUPERFAMILY Kelch motif 186 526 IPR015915 GO:0005515
Arst8g00281 578 FunFam F-box/kelch-repeat protein At5g42360 363 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00281 Arst-Chr8 4142312 4145216 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00281 - - gmx:100813797 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00281 8 4142312 4145216 Arst8g00281 8 4142312 4145216 ECH