Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00227 ATGGCCACCGTCACTACCTCTGCAGCTGTTACCATTCCATCATTTACTGGCTTAAAGGCAGCTACAACAAACGCCACCGCTAAAGTTAGTACCGGAGCTAAGGTGTCAGGACCCCAGTTTCCAAGGCTCAGCGTGAAGGCATCGTTCAAGGACGTTGGAGTAGCTGTTGTGGCCACCGCTGCCAGCGCAGTGCTAGCAAACAATGCCATGGCCATTGAGGTCTTGCTCGGTGGTGATGATGGGTCTCTGGCTTTTATCCCAAAGGATTTCTCAGTTGCTGCTGGAGAGAAGATCGTGTTCAAGAACAATGCTGGTTTCCCACACAACATTGTGTTCGACGAGGATGAGATTCCCAGCGGAGTGGACGCATCGAAAATCTCAATGTCTGAAGAAGACTTACTCAATGGACCTGGTGAGGTTTACAGCGTTACTTTGAGTGAGAAAGGAACCTACTCTTTCTATTGTGCCCCTCACCAAGGAGCTGGTATGGTTGGAAAAGTCACTGTTAACTAG 513 0.4951 MATVTTSAAVTIPSFTGLKAATTNATAKVSTGAKVSGPQFPRLSVKASFKDVGVAVVATAASAVLANNAMAIEVLLGGDDGSLAFIPKDFSVAAGEKIVFKNNAGFPHNIVFDEDEIPSGVDASKISMSEEDLLNGPGEVYSVTLSEKGTYSFYCAPHQGAGMVGKVTVN 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00227 170 Gene3D - 72 170 IPR008972 -
Arst8g00227 170 NCBIfam plastocyanin 72 170 IPR002387 GO:0005507|GO:0009055
Arst8g00227 170 PRINTS Plastocyanin signature 149 168 IPR002387 GO:0005507|GO:0009055
Arst8g00227 170 PRINTS Plastocyanin signature 100 118 IPR002387 GO:0005507|GO:0009055
Arst8g00227 170 PRINTS Plastocyanin signature 77 96 IPR002387 GO:0005507|GO:0009055
Arst8g00227 170 SUPERFAMILY Cupredoxins 69 170 IPR008972 -
Arst8g00227 170 CDD Plastocyanin 72 170 IPR002387 GO:0005507|GO:0009055
Arst8g00227 170 PANTHER PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED 21 170 - -
Arst8g00227 170 ProSitePatterns Type-1 copper (blue) proteins signature. 149 163 IPR028871 -
Arst8g00227 170 PRINTS Type I copper blue protein family signature 91 104 IPR001235 GO:0005507|GO:0009055
Arst8g00227 170 PRINTS Type I copper blue protein family signature 106 121 IPR001235 GO:0005507|GO:0009055
Arst8g00227 170 PRINTS Type I copper blue protein family signature 147 161 IPR001235 GO:0005507|GO:0009055
Arst8g00227 170 Pfam Copper binding proteins, plastocyanin/azurin family 73 170 IPR000923 GO:0005507|GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00227 Arst-Chr8 3109974 3110704 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00227 K02638 - rcu:8267840 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00227 8 3109974 3110704 Arst8g00227 8 3109974 3110704 ECH