Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00169 ATGGGAGAGAAATCGAAGTCAGGAGGGTGCTGTGGCTGGTTTATAGCCTTTTTGATTCTCGCTCTGGTGGTCGGTGCTATCGTTTACACCGTTAAGAAGAAGATCGGTCACTCCCATTCCGATAAGCCACTTCCGGTACCTGGTCCTCCCGGCGCCATCGACCAGAAATATTCCTCTGCACTCAAGACTTCCATGCAATTCTTTGATATACAAAAATCTGGAAAGTTAACTGACAACAAAATATCTTGGAGAGGGGATTCGGCTCTAAAGGATGGAAGCCAAGCAAATTTGGATCTGTCAAAAGGAATGTATGATGCTGGGGATCACATGAAGTTTGGGTTTCCAATGGCTTTTACTGCTACTGTGTTATCTTGGGCTATTCTGGAATATGGAGATCAAATGGATGCTGTTGGCCAGTTGGAACCGGCCAAAGATTCCCTCAAGTGGATCACTGATTACCTTATCAATGCTCATCCTTCTCCCAATGTTCTTTATATTCAGGTGGGAAATCCTGTTTCAGATCACAAATGTTGGGATAGGCCTGAATCCATGACTGAACCACGGCCTCTCACACAGATTAATGCATCTAGCCCTGGATCAGATGTTGCAGCTGAAACTGCAGCAGCAATGGCCTCGGCATCTTTGGTCTTCAAAAAGAGTGATTCTACATATTCAAGCACTCTCCTCAAGCATGCAAAGGAATTGTTTACTTTTGCAGATAAAAATAGAGGAATATATAGCGAGACTATACCTGATGTTGCAACATACTATAACTCAACTGGATACGGTGATGAACTTTTATGGGCAGCTAGCTGGCTCTATCATGCTACGGATGATGATTCTTACCTTAAGTATGTGACTGGTCAAAATGGAGAAGATTATGCACAATGGGGAAGTCCAACCTGGTTCAGTTGGGACAACAAGCTTGCTGGAACTCAGGTTTTGTTATCCAGATTAAGCTTCTTTAAGGCAAAGGACATTTCAAGCTCATACGGCTCTGGCCTACAAAATTACAGGAAATCAGCTGAGGCTGTAATGTGTGGCCTTCTTCCAGATTCTCCAACAGCCACACAAAGCAGAACAGATAAGGGCCTCATATGGGTCAGTGAGTGGAACGCTCTGCAGCATCCTGTTGCTTCTGCATTCTTGGCTGCTATTTACAGTGACTACATGCTTACATCACAGACCGCAAAACTAAAATGTGATTCCAGTTCCTATAGCCCATTAGATCTTCGAGACTTTGCCAAATCTCAGGCTGACTACGTACTGGGGAAGAACCCTATGCATATGAGTTTTCTAGTGGGATATGGAGATAAATACCCGCAATTTGTACATCACACATTCTTGAATGAGACTTTTATTGATTCCAGGAACAATTCTATGCAAACAGAACCAAGCACATATAACAGTGCTGTAATAGTTGGCCTGTTATCGAGTTTAGTCACCACATCTTCTATCGCTCAATCTCTTAAATAA 1476 0.4316 MGEKSKSGGCCGWFIAFLILALVVGAIVYTVKKKIGHSHSDKPLPVPGPPGAIDQKYSSALKTSMQFFDIQKSGKLTDNKISWRGDSALKDGSQANLDLSKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDAVGQLEPAKDSLKWITDYLINAHPSPNVLYIQVGNPVSDHKCWDRPESMTEPRPLTQINASSPGSDVAAETAAAMASASLVFKKSDSTYSSTLLKHAKELFTFADKNRGIYSETIPDVATYYNSTGYGDELLWAASWLYHATDDDSYLKYVTGQNGEDYAQWGSPTWFSWDNKLAGTQVLLSRLSFFKAKDISSSYGSGLQNYRKSAEAVMCGLLPDSPTATQSRTDKGLIWVSEWNALQHPVASAFLAAIYSDYMLTSQTAKLKCDSSSYSPLDLRDFAKSQADYVLGKNPMHMSFLVGYGDKYPQFVHHRXFLNETFIDSRNNSMQTEPSTYNSAVIVGLLSSLVTTSSIAQSLK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00169 492 FunFam Endoglucanase 53 450 - -
Arst8g00169 492 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 421 447 IPR018221 -
Arst8g00169 492 Pfam Glycosyl hydrolase family 9 57 476 IPR001701 GO:0004553|GO:0005975
Arst8g00169 492 Gene3D - 52 490 IPR012341 GO:0005975
Arst8g00169 492 MobiDBLite consensus disorder prediction 177 198 - -
Arst8g00169 492 PANTHER ENDO-1,4-BETA-GLUCANASE 20 448 - -
Arst8g00169 492 SUPERFAMILY Six-hairpin glycosidases 55 483 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00169 Arst-Chr8 2347637 2351855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00169 1 492 Glycoside Hydrolase AT1G75680 65.784 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00169 - - gmx:100812226 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00169 8 2347637 2351855 Arst8g00169 8 2347637 2351855 ECH