Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00153 ATGAGCAAGAAGGCGACAGCAGCACCTGATCCGGTGGCGGTGCTACGGGGCCACCGTGCTTCCGTGACGGACATTTGTTTTCATCCCTCTGATCGCATTCTCTTCTCTGGTTCTGTTGACGGTGAAGTTCGCATTTGGGATACCCTTCAGCATCGAACTCTCTCTTCTTCTTGGATACACAGTGCTGCCCACGGGATTGTTGCTGTCGCCACTAGTGCTTCCCTTGGAACCAATAAATTCGTTAGCCAGGGTAGGGATGGAACTGTTAAAGTTTGGGACTTTGTTCATTCTGCTTTGTCTAGGTACTCAACTCACTCACCTTTATTTTTAAATATCCCTCTTTTCTCTTTTCTCTTTTCCCTTTTTTGCTACACAGATGTTCCTGAACAATCACTTCGTGTTACTATTTTTTGGCATGAACTAGGGCGACGATCTCATATAGAAATTCTTGACGATAGAAGTTCTTCTCAAAGTTTCGAAGAAAATATGTATGCTGACGGGCTACAGTATGTGGCTTTAGCAGGGGAGAACCCGTCTGAGGTCGAAATTTGGGATCTCAAATCAGCTGAAAGATTTGTACGACTCCCTTCAAGCAACCCTAGTAGCTCTTCAGTTTGCAACAAAGACAGAGGGATGTGCATGGCACTTCAATTGTTTTTACCATCTGAATCACAGGGATCTCTAAATGTCTTGGCCGGTTATGAGGATGGCTCCATGCTTTGGTGGGATGTACGAAATCCTGGAGTTCCAGTAACCGCTGTAAAGCTCCATTCTGAACCAGTTTTGAGCATCTGTATTGATGGGTCATGCAGTGGGGGCATCTCAGGAGCTGCAGATGACAAGATTGTAATGTATAGCTTGGACCACTCTTCGGGTATATGTGTAATCAAGAAAGAAATCAATTTGGAGCGACCTGGCATATCAGGCACTTCAATTCGTGCTGATGAAAAAATTGCTGCAACTGCCGGTTGGGACCACAGAGTAAGGATATATAATTACCGCAAAGGAAATGCTTTAGCAATACTGAAGTATCACCATGCAACGTGCAATGCTGTAACTTACTCGTATGATTGTAAGCTTATGGCCTCTGCCTCCGAAGACACAACGGTGGGGCTTTGGGAATTATATCCTCCTCGAACATGA 1143 0.4497 MSKKATAAPDPVAVLRGHRASVTDICFHPSDRILFSGSVDGEVRIWDTLQHRTLSSSWIHSAAHGIVAVATSASLGTNKFVSQGRDGTVKVWDFVHSALSRYSTHSPLFLNIPLFSFLFSLFCYTDVPEQSLRVTIFWHELGRRSHIEILDDRSSSQSFEENMYADGLQYVALAGENPSEVEIWDLKSAERFVRLPSSNPSSSSVCNKDRGMCMALQLFLPSESQGSLNVLAGYEDGSMLWWDVRNPGVPVTAVKLHSEPVLSICIDGSCSGGISGAADDKIVMYSLDHSSGICVIKKEINLERPGISGTSIRADEKIAATAGWDHRVRIYNYRKGNALAILKYHHATCNAVTYSYDCKLMASASEDTTVGLWELYPPRT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00153 380 Gene3D - 153 378 IPR015943 GO:0005515
Arst8g00153 380 PANTHER TRANSDUCIN BETA-LIKE 3 3 375 - -
Arst8g00153 380 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 15 47 - -
Arst8g00153 380 ProSiteProfiles Trp-Asp (WD) repeats profile. 15 56 IPR001680 GO:0005515
Arst8g00153 380 ProSiteProfiles Trp-Asp (WD) repeats profile. 342 380 IPR001680 GO:0005515
Arst8g00153 380 Gene3D - 4 112 IPR015943 GO:0005515
Arst8g00153 380 PRINTS G protein beta WD-40 repeat signature 34 48 IPR020472 -
Arst8g00153 380 PRINTS G protein beta WD-40 repeat signature 80 94 IPR020472 -
Arst8g00153 380 PRINTS G protein beta WD-40 repeat signature 361 375 IPR020472 -
Arst8g00153 380 SMART WD40_4 293 332 IPR001680 GO:0005515
Arst8g00153 380 SMART WD40_4 335 374 IPR001680 GO:0005515
Arst8g00153 380 SMART WD40_4 51 93 IPR001680 GO:0005515
Arst8g00153 380 SMART WD40_4 247 286 IPR001680 GO:0005515
Arst8g00153 380 SMART WD40_4 8 47 IPR001680 GO:0005515
Arst8g00153 380 ProSitePatterns Trp-Asp (WD) repeats signature. 361 375 IPR019775 -
Arst8g00153 380 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 342 380 - -
Arst8g00153 380 SUPERFAMILY WD40 repeat-like 11 374 IPR036322 GO:0005515
Arst8g00153 380 Pfam WD domain, G-beta repeat 11 47 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00153 12 99 Miscellaneous Gene Families AT5G08390 29.545 4.62e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00153 K24770 - gmx:100800482 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00153 8 1876156 1882570 Arst8g00153 8 1876156 1882570 ECH