Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00128 ATGCCTATGGTCCTTTTGCCCCTATTTTTTCGTGAAACCATGGCTTCGCACATCTTCTCCCTTCTTCTTATGTTCTTCTTCGTCACTCTCGTCTCTGCTTCTTCCCCCGACACTTCCCAACTATTCCGGAGCTGGTGTGACCACCACGGCAAGACATACTCCTCCGACGAAGAGAGAAGCTACCGCCTCAAGGTTTTCCTGGACAACTATGACTATGTCCAGCGTCACAACCAGATGGCTAATTCCCCTTATACCCTCTCCCTCAACGCCTTCGCCGATCTTACCCACCAAGAACTCAAGGCCTCTCATCTTGGCGCTCTTTCCTCTTCCTTCCTCAGATTCAAGAATCGTCAAGATCACCAGCCCCGCTATCACAATGACAATGACAATAATATCCTCCGTCAGGTTCCTTCTTCAATTGATTGGAGAAATGAAGGGGCGGTTACTCCCGTCAAAAACCAAGGAAGCTGCGGGGCTTGTTGGGCGTTCTCTGCAACAGGAGCTATTGAAGGTATAAATAAGATTGTGACAGGGACCCTTGAAAGCCTTTCTGAACAAGAACTGGTTGATTGTGATAAAAAATACAACAGCGGCTGTGAAGGTGGTCTCATGGACTATGCTTATCAATTTGTGATTGATAACCACGGAATCGACACTGAGAGCGATTATCCATTCCTTGCTCATGATGCCGCTTGCAACAAGAACAAGATGAAGAGGCGTGTTGTTACAATTGATGGTTATACTGATGTGCTCCCAAGTAATGAGAAGAAGCTCCTAGAGGCTGTTGCAACCCAGCCTGTAAGTGTAGGCATATGTGGCAGTGCTAGGGCTTTTCAGTTATACTCTCAGGGTATCTTCACCGGACCATGTTCAACTGCTTTGGATCATGCAGTGTTGATTGTAGGGTATGGTTCAGAGAACGGAGTAGATTATTGGATTGTTAAGAACTCGTGGGGAACATCATGGGGAATGAATGGTTACATACACATGGTGCGAAACAACGGTTCTCAAGGGATATGCGGCATCAACATGCTAGCTTCGTATCCAACTAAGACGACGCCTAATCCTCCTCCTCCGCCACCACCAGGTCCTACAAAATGTAATCTGTTTACTTACTGTCCAGCAGCGGAAACCTGTTGCTGCTCATGGCGTGTTCTTGGGTTGTGCTTATCATACAAATGCTGTGGGTTAGACTCTGCTGTGTGCTGTAAGGACAATAGCCATTGTTGCCCTCAGGATTATCCTATTTGTGATATAAGAAACGCTCAATGTCTTAAGAGAGTTTCGAATGGGACAACAACGATGGCATATGAGAACAAAGACTCTATCCGTAGGTCAAGAGGTTGGAGCTCTGGTTAA 1359 0.465 MPMVLLPLFFRETMASHIFSLLLMFFFVTLVSASSPDTSQLFRSWCDHHGKTYSSDEERSYRLKVFLDNYDYVQRHNQMANSPYTLSLNAFADLTHQELKASHLGALSSSFLRFKNRQDHQPRYHNDNDNNILRQVPSSIDWRNEGAVTPVKNQGSCGACWAFSATGAIEGINKIVTGTLESLSEQELVDCDKKYNSGCEGGLMDYAYQFVIDNHGIDTESDYPFLAHDAACNKNKMKRRVVTIDGYTDVLPSNEKKLLEAVATQPVSVGICGSARAFQLYSQGIFTGPCSTALDHAVLIVGYGSENGVDYWIVKNSWGTSWGMNGYIHMVRNNGSQGICGINMLASYPTKTTPNPPPPPPPGPTKCNLFTYCPAAETCCCSWRVLGLCLSYKCCGLDSAVCCKDNSHCCPQDYPICDIRNAQCLKRVSNGTTTMAYENKDSIRRSRGWSSG 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00128 452 SMART GRAN_2 367 424 IPR000118 -
Arst8g00128 452 CDD Peptidase_C1A 137 348 IPR039417 -
Arst8g00128 452 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 311 330 IPR025661 -
Arst8g00128 452 SUPERFAMILY Granulin repeat 364 397 - -
Arst8g00128 452 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 154 165 IPR000169 -
Arst8g00128 452 SMART pept_c1 136 350 IPR000668 GO:0006508|GO:0008234
Arst8g00128 452 Pfam Papain family cysteine protease 136 349 IPR000668 GO:0006508|GO:0008234
Arst8g00128 452 SMART Inhibitor_I29_2 42 99 IPR013201 -
Arst8g00128 452 Gene3D Granulin 365 434 IPR037277 -
Arst8g00128 452 FunFam Senescence-specific cysteine protease 28 351 - -
Arst8g00128 452 SUPERFAMILY Cysteine proteinases 37 350 IPR038765 -
Arst8g00128 452 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 294 304 IPR025660 -
Arst8g00128 452 FunFam Cysteine protease 1 364 427 - -
Arst8g00128 452 Gene3D Cysteine proteinases 28 352 - -
Arst8g00128 452 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 37 348 IPR013128 GO:0008234
Arst8g00128 452 PRINTS Papain cysteine protease (C1) family signature 154 169 IPR000668 GO:0006508|GO:0008234
Arst8g00128 452 PRINTS Papain cysteine protease (C1) family signature 311 317 IPR000668 GO:0006508|GO:0008234
Arst8g00128 452 PRINTS Papain cysteine protease (C1) family signature 296 306 IPR000668 GO:0006508|GO:0008234
Arst8g00128 452 Pfam Granulin 378 425 IPR000118 -
Arst8g00128 452 Pfam Cathepsin propeptide inhibitor domain (I29) 42 98 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00128 Arst-Chr8 1401550 1403883 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00128 - - ahf:112705594 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00128 8 1401550 1403883 Arst8g00128 8 1401550 1403883 ECH