Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03221 ATGGGGGCGGTGGTGCAGCGGTTGTGGTTGCTCCGTTCGCATACAGCTCCCATATCACTACTAAGGAGCTCAGATACGACGTCGTTGGCGAGATGTTTGAGCTCCAAAGCAGGGTCAGGGTGGTTTCGCGGGCTCGAAGGGAACAAGAAGTCGAAACTGCCCTCTATTGTGAAAGCTGGAGAACCGGTACTGCACGAGCGTGCAATGGAAGTGAATGTGAAGGAGATAAAGTCAGAAAGAGTGCAGAGTATTATCGATGACATGATCAAGGTCATGAGGAAAGCCCCTGGTGTTGGCCTGGCTGCTCCTCAGATTGGAATCCCCTTTAGGATAATTGTTTTGGAAGATAAAGAGGAATATATTGGTCTTGACACTAAGGAAGAGGCTGAAGCTCAAGATAGAAGACCTTTTGATCTCTTGGTTATCTTGAATCCTAAGCTAAAGAACAAGACCAACAGGACAGCCCTTTTCTTTGAAGGCTGCTTGAGTGTTAATGGATTTCTAGGTGTTGTGGAGCGTTACCTCGATGTTGAGGTATCGGGTTATGATCGTCATGGTGAGCCTATCAAAATAAATGCTACAGGTTGGCAGGCTCGGATTTTACAGCACGAGTGCGATCATCTGGATGGAACTCTCTATGTTGATAAGATGCTACCTAAAACTTTCAGAACTGCCGAAAACCTGGACTTGCCTCTTGCCTGTGCCTGCCCAAAACTTGGTTCCCGCTAA 729 0.4733 MGAVVQRLWLLRSHTAPISLLRSSDTTSLARCLSSKAGSGWFRGLEGNKKSKLPSIVKAGEPVLHERAMEVNVKEIKSERVQSIIDDMIKVMRKAPGVGLAAPQIGIPFRIIVLEDKEEYIGLDTKEEAEAQDRRPFDLLVILNPKLKNKTNRTALFFEGCLSVNGFLGVVERYLDVEVSGYDRHGEPIKINATGWQARILQHECDHLDGTLYVDKMLPKTFRTAENLDLPLACACPKLGSR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03221 242 CDD Pep_deformylase 56 213 IPR023635 GO:0042586
Arst7g03221 242 SUPERFAMILY Peptide deformylase 53 224 IPR036821 -
Arst7g03221 242 PANTHER PEPTIDE DEFORMYLASE 48 229 IPR023635 GO:0042586
Arst7g03221 242 NCBIfam peptide deformylase 56 220 IPR023635 GO:0042586
Arst7g03221 242 Hamap Peptide deformylase [def]. 52 228 IPR023635 GO:0042586
Arst7g03221 242 Pfam Polypeptide deformylase 55 219 IPR023635 GO:0042586
Arst7g03221 242 FunFam Peptide deformylase 53 236 - -
Arst7g03221 242 Gene3D Peptide deformylase 52 241 IPR036821 -
Arst7g03221 242 PRINTS Peptide deformylase signature 171 189 IPR023635 GO:0042586
Arst7g03221 242 PRINTS Peptide deformylase signature 86 115 IPR023635 GO:0042586
Arst7g03221 242 PRINTS Peptide deformylase signature 190 219 IPR023635 GO:0042586
Arst7g03221 242 PRINTS Peptide deformylase signature 159 170 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03221 Arst-Chr7 78135345 78137320 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g03221 K01462 - cave:132187014 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g03221 7 78135345 78137320 Arst7g03221 7 78135345 78137320 ECH
Arst7g03221 7 78135345 78137320 Arst9g00172 9 1251832 1254858 PCT