Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03077 ATGATTGGAATTGGATCATTGGCTGGATCATCAATCTTGCTTCTGACTATAGTTTGGGGAACATGTGTTATCACTGGCAGCAAAGATTTTGAGCACAGTGAAGGATCTAACTCATCATCATCATCATCACCTAAAACTCTCAAACCTTCATTCACTAGTCATGGCATTACTATAGATTTGGAGACAAAACAAGCAGCAAGCAATATGTTAGGTTCAACAATTTTATTACAATTATCTTATGGGACAACAACTCTGCAATCCATAATTGGTCTCATCTTTGCTTCCCTTCTTCTCTTCTTTTATTTTACTAAACAGGTTTTTGAACCTTGGCGACAGAAAAGAAGATTGGAATACTTGAAACATGATGATTTAATGTTAAGAATACTAAGTTTTGTAGAAAAGAATACTCTACAAAGGATACTCACCAAGAATGGGACTCCAAATGTGAGTGCCATTAGAAGGTTGTACAGGGAAATAGATGAAGATAGGAGCAGTGGCATATCAGCTTCTGAACTAAGAGACCTATTGCTACAAAACAAAGTAACAGACACAAGTATCGACGAGGAGAAAGAAATAGAAGAGGTATTGAAATTTTTTGATCATGGTCATGATCAAATGATAACCAAGGATGAGTTTGTTGTTGGCTTTGCAAAGTGGCTTGATCAAACAAAGCATGATTTGGATAAAGAGTATCTTTCAAGGAAATCAATGAAGGACTTATATGAGGTTTTTGGGCCATGGACTGAAAACAAAAGAAAAGAAAGAGAAGGGAAGAAACAAATCATATCTAAAATATTAAGGCATGTTCAGAATGATATGGTTGGAAGCCTTCTCAGAAATGATGGAAAACCTGATGAGATAGCCATTAAAAGGTTGTTCGAAAAAATTGACCGCAATAAAGACAACTGCGTCTCGCAATCTGAACTGAAAGAACTAATGATGAACATCGCATTTGTTAAAGCATCAATGGAAGTGGAGAAGGCAGTTGCTTTAGTCATTGATGAACTTGACCATGACATAGATCAGATAATCAATGAGGAGGAATTTGTTGCTGTGTTTGAGAAATCACTTAACAAAATTTCAAGTCATGCTCCTTTTTCTGATTCTGACTCTGAAGAAGATATATATCAAGCATGGGAAGAGGCAGGCATGGTGGTGGAAAATAAAGAAAGCAAAGCAATAGTAGATAAATCAATATGGGGAAGGTTGATGGCCACAACAAATATGGTGCTAGGAATTGTTATTATATGCATTGTGGCACAACCGCTTATGGAAAGTGTCAGAAAATTCTCCAACAGTTTAGGAGTTCATGCTGCCTTTGTCTCATTTGTTCTAGTCCCCTTGGCCATAAATGCAAGAGAAGCAACTACAGCAATTAAAAAAACAAGCTATAAGAATTCTAGGACTATTTCTCTTGCTATTTCTGAGATATATGGAGGGGTTCTCATGAATAACATTGTTGGATTTTTTGCTATCTCCATTATGATCTATGTCCGACAAGTTACTCATGTATTCCCATCAGAATTGATGGTCGCTACACTTGTTTGTCAGATTATAAGCGTTATTTTAGGTTGTCACTACACTTTCTCTCCATGGTCATGTGTATATGCTTATTTTGCATATTTTTTCTCCTTGGTTTTGAGTTTTTGTATTTAG 1656 0.3611 MIGIGSLAGSSILLLTIVWGTCVITGSKDFEHSEGSNSSSSSSPKTLKPSFTSHGITIDLETKQAASNMLGSTILLQLSYGTTTLQSIIGLIFASLLLFFYFTKQVFEPWRQKRRLEYLKHDDLMLRILSFVEKNTLQRILTKNGTPNVSAIRRLYREIDEDRSSGISASELRDLLLQNKVTDTSIDEEKEIEEVLKFFDHGHDQMITKDEFVVGFAKWLDQTKHDLDKEYLSRKSMKDLYEVFGPWTENKRKEREGKKQIISKILRHVQNDMVGSLLRNDGKPDEIAIKRLFEKIDRNKDNCVSQSELKELMMNIAFVKASMEVEKAVALVIDELDHDIDQIINEEEFVAVFEKSLNKISSHAPFSDSDSEEDIYQAWEEAGMVVENKESKAIVDKSIWGRLMATTNMVLGIVIICIVAQPLMESVRKFSNSLGVHAAFVSFVLVPLAINAREATTAIKKTSYKNSRTISLAISEIYGGVLMNNIVGFFAISIMIYVRQVTHVFPSELMVATLVCQIISVILGCHYTFSPWSCVYAYFAYFFSLVLSFCI 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03077 551 Pfam EF-hand domain pair 288 353 IPR002048 GO:0005509
Arst7g03077 551 Gene3D - 104 216 - -
Arst7g03077 551 ProSitePatterns EF-hand calcium-binding domain. 297 309 IPR018247 -
Arst7g03077 551 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 2 546 IPR004713 GO:0006812|GO:0008324|GO:0016020
Arst7g03077 551 Gene3D - 217 362 - -
Arst7g03077 551 ProSiteProfiles EF-hand calcium-binding domain profile. 147 182 IPR002048 GO:0005509
Arst7g03077 551 ProSiteProfiles EF-hand calcium-binding domain profile. 284 319 IPR002048 GO:0005509
Arst7g03077 551 SMART efh_1 151 179 IPR002048 GO:0005509
Arst7g03077 551 SMART efh_1 288 316 IPR002048 GO:0005509
Arst7g03077 551 SMART efh_1 328 356 IPR002048 GO:0005509
Arst7g03077 551 SMART efh_1 191 219 IPR002048 GO:0005509
Arst7g03077 551 Pfam Sodium/calcium exchanger protein 409 549 IPR004837 GO:0016020|GO:0055085
Arst7g03077 551 SUPERFAMILY EF-hand 149 353 IPR011992 -
Arst7g03077 551 ProSiteProfiles EF-hand calcium-binding domain profile. 187 222 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03077 Arst-Chr7 77160568 77164371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g03077 240 551 EF-hand Containing Proteins AT1G53210 34.251 2.12e-49 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g03077 - - aip:107612772 1013.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g03077 7 77160568 77164371 Arst7g03077 7 77160568 77164371 ECH