Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03075 ATGATTGGAATTGGATCATTGGCTGGATCATCAATCTTGCTTCTGACTATAGTTTGGGGAACATGTGTTATCACTGGCAGCAAAGATTTTGAGCACAGTGAAGGATCTAACTCATCATCATCATCATCACCTAAAACTCTCAAACCTTCATTCACTAGTCATGGCATTACTATAGATTTGGAGACAAAACAAGCAGCAAGCAATATGTTAGGTTCAACAATTTTATTACAATTATCTTATGGGACAACAACTCTGCAATCCATAATTGGTCTCATCTTTGCTTCCCTTCTTCTCTTCTTTTATTTTACTAAACAGGTTTTTGAACCTTGGCGACAGAAAAGAAGATTGGAATACTTGAAACATGATGATTTAATGTTAAGAATACTAAGTTTTGTAGAAAAGAATACTCTACAAAGGATACTCACCAAGAATGGGACTCCAAATGTGAGTGCCATTAGAAGGGAAATAGATGAAGATAGGAGCAGTGGCATATCAGCTTCTGAACTAAGAGACCTATTGCTACAAAACAAAGTAACAGACACAAGTATCGACGAGGAGAAAGAAATAGAAGAGGTATTGAAATTTTTTGATCATGGTCATGATCAAATGATAACCAAGGATGAGTTTGTTGTTGGCTTTGCAAAGTGGCTTGATCAAACAAAGCATGATTTGGATAAAGAGTATCTTTCAAGGAAATCAATGAAGGACTTATATGAGGTTTTTGGGCCATGGACTGAAAACAAAAGAAAAGAAAGAGAAGGGAAGAAACAAATCATATCTAAAATATTAAGGCATGTTCAGAATGATATGGTTGGAAGCCTTCTCAGAAATGATGGAAAACCTGATGAGATAGCCATTAAAAGGTTGTTCGAAAAAATTGACCGCAATAAAGACAACTGCGTCTCGCAATCTGAACTGAAAGAACTAATGATGAACATCGCATTTGTTAAAGCATCAATGGAAGTGGAGAAGGCAGTTGCTTTAGTCATTGATGAACTTGACCATGACATAGATCAGATAATCAATGAGGAGGAATTTGTTGCTGTGTTTGAGAAATCACTTAACAAAATTTCAAGTCATGCTCCTTTTTCTGATTCTGACTCTGAAGAAGATATATATCAAGCATGGGAAGAGGCAGGCATGGTGGTGGAAAATAAAGAAAGCAAAGCAATAGTAGATAAATCAATATGGGGAAGGTTGATGGCCACAACAAATATGGTGCTAGGAATTGTTATTATATGCATTGTGGCACAACCGCTTATGGAAAGTGTCAGAAAATTCTCCAACAGTTTAGGAGTTCATGCTGCCTTTGTCTCATTTGTTCTAGTCCCCTTGGCCATAAATGCAAGAGAAGCAACTACAGCAATTAAAAAAACAAGCTATAAGAATTCTAGGACTATTTCTCTTGCTATTTCTGAGATATATGGAGGGGTTCTCATGAATAACATTGTTGGATTTTTTGCTATCTCCATTATGATCTATGTCCGACAAGTTACTCATGTATTCCCATCAGAATTGATGGTCGCTACACTTGTTTGTCAGATTATAAGCGTTATTTTAGGTTGTCACTACACTTTCTCTCCATGGTCATGTGTATATGCTTATTTTGCATATTTTTTCTCCTTGGTTTTGAGTTTTTGTATTTAG 1647 0.3607 MIGIGSLAGSSILLLTIVWGTCVITGSKDFEHSEGSNSSSSSSPKTLKPSFTSHGITIDLETKQAASNMLGSTILLQLSYGTTTLQSIIGLIFASLLLFFYFTKQVFEPWRQKRRLEYLKHDDLMLRILSFVEKNTLQRILTKNGTPNVSAIRREIDEDRSSGISASELRDLLLQNKVTDTSIDEEKEIEEVLKFFDHGHDQMITKDEFVVGFAKWLDQTKHDLDKEYLSRKSMKDLYEVFGPWTENKRKEREGKKQIISKILRHVQNDMVGSLLRNDGKPDEIAIKRLFEKIDRNKDNCVSQSELKELMMNIAFVKASMEVEKAVALVIDELDHDIDQIINEEEFVAVFEKSLNKISSHAPFSDSDSEEDIYQAWEEAGMVVENKESKAIVDKSIWGRLMATTNMVLGIVIICIVAQPLMESVRKFSNSLGVHAAFVSFVLVPLAINAREATTAIKKTSYKNSRTISLAISEIYGGVLMNNIVGFFAISIMIYVRQVTHVFPSELMVATLVCQIISVILGCHYTFSPWSCVYAYFAYFFSLVLSFCI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03075 548 SMART efh_1 285 313 IPR002048 GO:0005509
Arst7g03075 548 SMART efh_1 325 353 IPR002048 GO:0005509
Arst7g03075 548 SMART efh_1 188 216 IPR002048 GO:0005509
Arst7g03075 548 SUPERFAMILY EF-hand 154 350 IPR011992 -
Arst7g03075 548 Gene3D - 217 357 - -
Arst7g03075 548 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 2 543 IPR004713 GO:0006812|GO:0008324|GO:0016020
Arst7g03075 548 Gene3D - 151 216 - -
Arst7g03075 548 ProSiteProfiles EF-hand calcium-binding domain profile. 184 219 IPR002048 GO:0005509
Arst7g03075 548 Pfam Sodium/calcium exchanger protein 406 546 IPR004837 GO:0016020|GO:0055085
Arst7g03075 548 Pfam EF-hand domain pair 285 350 IPR002048 GO:0005509
Arst7g03075 548 ProSitePatterns EF-hand calcium-binding domain. 294 306 IPR018247 -
Arst7g03075 548 ProSiteProfiles EF-hand calcium-binding domain profile. 281 316 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03075 Arst-Chr7 77160568 77164372 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g03075 237 548 EF-hand Containing Proteins AT1G53210 34.251 2.50e-49 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g03075 - - aip:107612772 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g03075 7 77160568 77164372 Arst7g03075 7 77160568 77164372 ECH