Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03039 ATGGCTTCCACTTCCATTAACACTTTCACTGGTTTTGTTGGATGGAAATCTTCTTCTTTGTTTCCACATTCTAATGCCTTAAACGCTACACTCTCACTCCCTTTCAAACCAAAACCGCACTTCTCCGTCACTTGCTCTGCCTCTTCTTCCGATCCTCTGCTGGTGAAGGCTGCCAGAGGAGAACCTGTTAGTCGGCCACCAGCATGGATGATGCGCCAGGCGGGAAGGTACATGGCTGTTTACAGAAAGCTTGCTGAGAAATATCCATCCTTTCGAGAGAGGTCGGAGACAACTGATCTCATTGTGGAAATTTCTTTGCAGCCTTGGAATGCCTTTAGGCCTGATGGAGTGATCATTTTCTCTGACATCCTTACGCCTCTTCCTGCATTTGGGGTCGAATTCGACATTGAAGACGTAAGGGGTCCTGTTATTCAGTCCCCAATACGCTCCGAGGAGGGACTAAAGGCTCTGCATCCAATTGACCTGGAAAAGCTCAGTTTTGTTGGAGATTCACTCAAGATACTGCGCAAGGAGGTTGGTGGTGATGCTGCCGTTTTAGGTTTTGTGGGAGCACCTTGGACAATAGCAACATATATAGTGGAAGGGGGTACAACACGCACCTATACAACCATTAAGAGTATGTGCCATACAGCACCACATTTATTGCGGACTCTGCTCTCTCATTTGGCGCAAGCAATAGCAGATTATGTTGTTTTCCAAGTGGAGTCTGGGGCTCACTGCATACAAATATTTGATTCATGGGGTGGACAACTACCACCTGATATGTGGGAATGCTGGTCAAAGCCTTATATCAAAGAGATTGTAGATTTGGTCAAGAAAAGATGCCCCGAGACACCGATTGTTCTTTATATAAATGGAAATGGTGGCCTGCTTGAGCGTATGAAAGATACTGGAGTTGATGTTATTGGGCTGGACTGGACTGTGGATATGGCAGATGGAAGAAGAAGATTGGGTAGTGGAATAGGTGTGCAGGGAAATGTGGACCCTGCCTACTTATTCTCCCCACTTCCTGCTCTCACTGAAGAAATTCAGAGGGTTGTGAGGTGTGCTGGGCCTAGACGGCACATCCTTAATCTCGGGCATGGTGTTCTTGTTGGCACACCTGAAGAAGCTGTTGCACATTTCTTTGAAGTTGCTAGGAGCTTGAAGTTTGATACACTTTTTCAAAACAAATCTGCAGAAGATCCTAGATTGGTAGCTTAA 1224 0.4608 MASTSINTFTGFVGWKSSSLFPHSNALNATLSLPFKPKPHFSVTCSASSSDPLLVKAARGEPVSRPPAWMMRQAGRYMAVYRKLAEKYPSFRERSETTDLIVEISLQPWNAFRPDGVIIFSDILTPLPAFGVEFDIEDVRGPVIQSPIRSEEGLKALHPIDLEKLSFVGDSLKILRKEVGGDAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHLLRTLLSHLAQAIADYVVFQVESGAHCIQIFDSWGGQLPPDMWECWSKPYIKEIVDLVKKRCPETPIVLYINGNGGLLERMKDTGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPAYLFSPLPALTEEIQRVVRCAGPRRHILNLGHGVLVGTPEEAVAHFFEVARSLKFDTLFQNKSAEDPRLVA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03039 407 CDD URO-D 56 388 IPR006361 GO:0004853|GO:0006779
Arst7g03039 407 ProSitePatterns Uroporphyrinogen decarboxylase signature 2. 186 202 IPR000257 GO:0004853|GO:0006779
Arst7g03039 407 Gene3D - 43 391 IPR038071 -
Arst7g03039 407 PANTHER METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED 46 391 - -
Arst7g03039 407 Pfam Uroporphyrinogen decarboxylase (URO-D) 53 388 IPR000257 GO:0004853|GO:0006779
Arst7g03039 407 Hamap Uroporphyrinogen decarboxylase [hemE]. 50 390 IPR006361 GO:0004853|GO:0006779
Arst7g03039 407 SUPERFAMILY UROD/MetE-like 53 389 IPR038071 -
Arst7g03039 407 ProSitePatterns Uroporphyrinogen decarboxylase signature 1. 67 76 IPR000257 GO:0004853|GO:0006779
Arst7g03039 407 FunFam Uroporphyrinogen decarboxylase 43 391 - -
Arst7g03039 407 NCBIfam uroporphyrinogen decarboxylase 54 387 IPR006361 GO:0004853|GO:0006779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03039 Arst-Chr7 76519395 76522607 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g03039 K01599 - gmx:100807032 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g03039 7 76519395 76522607 Arst7g03039 7 76519395 76522607 ECH