Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02901 ATGGCGACGCATACCCCAAAGAATATTCTCATTACTGGGGCAGCTGGATTTATTGCATCTCATGTGGCCAACCGGCTCATTCGGAAGTATCCTGACTACAAAATTGTTGTTCTTGACAAGCTTGATTACTGTTCTAATCTGAAGAACCTCATTCCTTCAAAGTCATGCCCCAACTTTAAGTTTGTGAAGGGTGATATTGGAAGTGCTGACCTTGTCAACTACCTTCTCATCACTGAGTCAATTGACACGATAATGCACTTTGCTGCTCAGACCCATGTTGACAACTCCTTTGGTAACAGCTTTGAGTTCACCAAGAACAACATCTACGGCACTCATGTCCTGTTAGAGGCTTGCAAGGTGACTGGTCAGATCAAAAGGTTCATCCATGTGAGCACTGATGAGGTCTATGGGGAGACAGAGGAGGATGCCGTGGTTGGAAACCATGAGGCTTCTCAGCTGCTTCCTACAAATCCATACTCTGCCACAAAAGCTGGGGCAGAGATGCTTGTCATGGCATATGGTAGATCCTATGGTTTACCTGTGATCACAACACGTGGAAACAATGTCTATGGGCCGAACCAGTTTTGAGAAGCTAATTCCAAAGTTCATCCTCCTGAGAAGTTGATTCCAAAATTCATCCTTCTAGCTATGCAGGGAAAGAATCTTCCCATTCACGGCGACGGTTCGAACGTGAGGAGTTATCTTTATTGTGAAGATGTTGCAGAGGCCTTTGAAGTTGTTCTTCACAAGGGAGAAGTTGGTCATGTTTACAACATTGGGACCAAGAAGGAAAGAAGAGTTATTGATGTAGCCAAAGATATATGCAGACTATTCTCCATGGACCCAGAGACAAGCATAAAATTTGTGGAGAACAGACCATTCAATGACCAGAGATACTTTCTTGATGATCAAAAGCTGAAGGACTTGGGGTGGTCCGAGAGGACCACTTGGGAAGAGGGGTTGAAGAAAACCATGGACTGGTACATCAATAATCCTGATTGGTGGGGTGATGTCAGTGGTGCATTGCTTCCTCATCCAAGGATGCTCATGATGCCTGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCATCATATGTCTCGACTAACACTAAAATGGTGGTTCCACCAACCAAGAGCGCTACCGGCACTCCCCAGAAGCCTGCTCTAAAGTTCTTGATCTATGGCAGAACAGGATGGATAGGTGGATTGCTTGGGAAGTTGTGTGAAAAGCAAGGGATTCCGTACGAATATGGAAAAGGGCGCCTAGAGGATCGCTCATCACTTGTTGCTGATATTCAGAATATCAAGCCGACACATATTTTCAATGCTGCAGGAGTGACCGGCAGACCCAATGTTGATTGGTGTGAGACTCATAAGACTGAAACCATCCGCACCAATGTTGCCGGGACTTTAACATTGGCTGATGTCAGCAGAGAGCATGGTCTCTTGATGATAAATTATGCTACTGGTTGCATATTTGAGTATGATGAAGCTCACCCTCTGGGATCTGGCAAAGGTTTCAAGGAGGAAGATACCCCTAATTTTGCTGGTTCTTTCTATTCCAAAACTAAGGCTATGGTTGAGCAACTTTTGAAAGAATATGACAATGTATGCACACTCAGGGTTCGCATGCCCATTTCTTCTGATCTGAGCAACCCGCGCAACTTCATTACCAAGATTTCTCGCTATAACAAGGTGGTTAACATTCCAAACAGCATGACTATCCTGGACGAGCTCCTGCCTATTTCAATCGAGATGGCAAAGCGCAACCTGAGCGGCATCTGGAACTTCACAAACCCAGGGGCCGTGAGTCACAACGAGATCCTGGAGATGTACAGGGACTACATTGACCCCAACTTCAAGTGGGTTAATTTCACCCTTGAAGAGCAAGCCAAAGTGATTGTTGCAGCGCGAAGCAACAACGAGATGGACGCATCAAAGTTGAAGAAAGAATTCCCAGAACTGCTTTCCATCAAGGAATCACTGATCAAATATGTCTTCGAGCCAAACAAGAAAACTGGTTTGAAAAATTAA 2040 0.4441 MATHTPKNILITGAAGFIASHVANRLIRKYPDYKIVVLDKLDYCSNLKNLIPSKSCPNFKFVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIKRFIHVSTDEVYGETEEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFXEANSKVHPPEKLIPKFILLAMQGKNLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICRLFSMDPETSIKFVENRPFNDQRYFLDDQKLKDLGWSERTTWEEGLKKTMDWYINNPDWWGDVSGALLPHPRMLMMPGXXXXXXXXXXXASYVSTNTKMVVPPTKSATGTPQKPALKFLIYGRTGWIGGLLGKLCEKQGIPYEYGKGRLEDRSSLVADIQNIKPTHIFNAAGVTGRPNVDWCETHKTETIRTNVAGTLTLADVSREHGLLMINYATGCIFEYDEAHPLGSGKGFKEEDTPNFAGSFYSKTKAMVEQLLKEYDNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLSGIWNFTNPGAVSHNEILEMYRDYIDPNFKWVNFTLEEQAKVIVAARSNNEMDASKLKKEFPELLSIKESLIKYVFEPNKKTGLKN 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02901 679 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 3 347 - -
Arst7g02901 679 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 382 678 - -
Arst7g02901 679 Pfam GDP-mannose 4,6 dehydratase 10 324 IPR016040 -
Arst7g02901 679 Gene3D - 9 322 - -
Arst7g02901 679 FunFam UDP-glucose 4,6-dehydratase 9 221 - -
Arst7g02901 679 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 342 IPR036291 -
Arst7g02901 679 Pfam RmlD substrate binding domain 392 562 IPR029903 -
Arst7g02901 679 CDD dTDP_GD_SDR_e 7 333 IPR005888 GO:0008460|GO:0009225
Arst7g02901 679 CDD dTDP_HR_like_SDR_e 392 664 - -
Arst7g02901 679 Gene3D - 383 679 - -
Arst7g02901 679 Gene3D - 209 331 - -
Arst7g02901 679 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 391 666 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02901 Arst-Chr7 73667872 73671440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02901 8 330 Miscellaneous Gene Families AT4G00110 26.087 1.27e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02901 K12450 - gmx:100789909 1251.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02901 7 73667872 73671440 Arst7g02901 7 73667872 73671440 ECH