Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02548 ATGGCCATGGCTCTTCGTAGACTCTCCTCCACTCTTAACAAACAAACATATTCCCTTTATCGCATGTCTTCTTCTCTGTCGCTGCAAGAGAGAGACAAAGCTCGCGCTGCCTGGGTGAAGCAGCTCAACGAGCCTCTCGAAGTCATTGATCCTGAGATCGCCGAAATAATCGAACTCGAAAAAGCTCGTCAATGGAAGGGGCTGGAACTTATACCTTCGGAGAACTTCACGTCAGTGTCAGTGATGCAAGCTGTTGGATCTGTGATGACAAACAAATACAGCGAAGGGTATCCGGGAGCTAGATACTACGGAGGAAATGAGTACATTGACATGGCCGAGACCTTGTGTCAGAAACGTGCACTTGAAGCTTTCAATTTGGATCCAGCAAAATGGGGAGTTAATGTGCAGTCATTATCTGGCTCCCCTTCCAACTTCCAAGTTTACACTGCTTTATTGAAGCCTCATGAGAGAATTATGGCACTTGATCTTCCACATGGTGGGCATTTGTCACATGGCTATCAGACTGACACCAAGAAGATATCAGCTGTATCTATATTCTTTGAAACGATGCCATACAGATTGGATGAAAGCACTGGTTATATTGATTATGACCAGTTGGAGAAAAGTGCTGCACTTTTTAGGCCAAAATTAATAGTTGCTGGTGCCAGTGCTTATTCCCGCCTTTACGATTATGCAAGAATTCGCAAGGTCTGTGATAAGCAGAAGGCAATTATGTTGGCTGATATGGCACACATCAGTGGATTGGTTTCTGCAGGTGTTATTCCTTCTTGTTTTGATTATGCAGATGTTGTGACAACCACAACACATAAGTCACTCCGTGGACCACGTGGGGCTATGATCTTCTTCAGGAAGGGTCTGAAAGAGATAAACAAGCAAGGGAAGGAAGTGTTCTATGACTATGAAGATAAAATAAATCAGGCTGTTTTTCCTGGACTTCAAGGTGGTCCACACAACCACACAATTTCAGGCTTAGCAGTTGCACTGAAGCAGGCTATGACACAAGAATTCAAGGATTACCAAAAGCAAGTTGTCAGTAATTGTGCGGTATTCTCACAGAGTTTGCTAGAGAAAGGCTACGATATTGTATCTGGTGGAACTGATAACCATCTATTGTTAGTGAACTTAAGAAACAAGGGCATCGATGGCTCAAGGGTAGAGAAGGTGTTAGAAGCAGTTCATATAGCAGCCAATAAAAATACTGTTCCAGGGGATGTGTCTGCTATGGTTCCCGGAGGCATCCGAATGGGGACCCCTGCTCTCACATCAAGAGGGTTTGTTGAGGAGGATTTTAAGAAAGTAGCTGAATTTTTTGATTTAGGAGTCAAGTTAGCCTTACAGATTAAGGCAAATACCAAAGGTACGAAGTTGAAAGATTTTTCTGCAGAAATGCAATCAGATGCATACCAATCTGATATTGCAAAGCTCCGTCATGAAGTTGAGGAATATGCAAAGCAGTTCCCCACAATTGGCTTTGAGGTGGAGAAAATGAAGTACGGTAATTGA 1524 0.4324 MAMALRRLSSTLNKQTYSLYRMSSSLSLQERDKARAAWVKQLNEPLEVIDPEIAEIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFNLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSAALFRPKLIVAGASAYSRLYDYARIRKVCDKQKAIMLADMAHISGLVSAGVIPSCFDYADVVTTTTHKSLRGPRGAMIFFRKGLKEINKQGKEVFYDYEDKINQAVFPGLQGGPHNHTISGLAVALKQAMTQEFKDYQKQVVSNCAVFSQSLLEKGYDIVSGGTDNHLLLVNLRNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFKKVAEFFDLGVKLALQIKANTKGTKLKDFSAEMQSDAYQSDIAKLRHEVEEYAKQFPTIGFEVEKMKYGN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02548 507 CDD SHMT 50 489 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Arst7g02548 507 Hamap Serine hydroxymethyltransferase [glyA]. 45 497 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Arst7g02548 507 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 269 285 IPR019798 GO:0030170
Arst7g02548 507 PIRSF SHMT 27 502 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Arst7g02548 507 Gene3D - 75 348 IPR015421 GO:0003824
Arst7g02548 507 Gene3D Aspartate Aminotransferase, domain 1 50 494 IPR015422 GO:0003824
Arst7g02548 507 SUPERFAMILY PLP-dependent transferases 37 498 IPR015424 -
Arst7g02548 507 Coils Coil 472 492 - -
Arst7g02548 507 Pfam Serine hydroxymethyltransferase 47 443 IPR039429 -
Arst7g02548 507 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 33 500 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Arst7g02548 507 FunFam Serine hydroxymethyltransferase 75 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02548 Arst-Chr7 64008476 64014509 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02548 K00600 - gmx:100816213 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02548 7 64008476 64014509 Arst7g02548 7 64008476 64014509 ECH