LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst7g02298	ATGGCGTCTGCATGTGTGACCTTCCAAGCCAATACCCATTTACCAAACACAGAGAAAGGTGATATCTTTCATCAAGAGAATGGCTTCTTCGGTGAAAGAATCAAAAGGAGCTTCAATAGCAGCCCCTGTGTCGTTAAAGCTGCCCACAAGTGGGTCAAGCCTGGCGGTGTTTCTGCTGTTCTTACTTCAAAAAATTCCACCAAACAAACCCTGAATCAGACACTACAAGTGCCTTCTTTCCTTAAGAAAAAGGTTGGGGCTGACCCAAACAATGTTGTTTCCATCATACTTGGAGGAGGATCAGGGGCTCATCTTTTTCCTCTCACCAAACGAGCTGCAACCCCTGCTGTACCTGTTGGTGGATGCTACAGGCTCATAGATATTCCAATGAGTAACTGCATCAACAGTGGCATTAACAAGATATTTGTGCTGACACAGTTCAACTCTGCTTCTCTAAATCGTCACATTGCACGCACCTATTTTGGAAATGGCATCAGCTTTGGGGATGGCTTTGTGGAGGTTTTGGCTGCTACTCAAACACCAGGAGAAGCTGGAAAGAATTGGTTCCAAGGAACTGCAGATGCTGTGAGGCAATTTACATGGGTGTTTGAGGATGCCAAGAACAGAAATGTTGAGAATGTATTGATCTTGGCCGGAGATCATCTATACCGAATGGATTACATGGATCTCGTGCAGAGTCATGTTGATAGAAATGCTGATATCACAGTTTCTTGCGCTGCCGTGGGAGAAAGCCGTGCATCAGATTATGGACTGGTCAAAGTAGATGACACAGGCCGAGTCATTCAATTTTCAGAAAAACCAAAGGATGATGATCTAAAAGCAATGCATGTAGATACCTCTTTTCTTGGGTTGTCACCTCAAGATGCATCAATGTCACCATACGTTGCCTCTATGGGGGTCTATGTATTCAAAACAGATGTCTTACTCGATCTTCTGAAATGGAGATATCCTGCATCCAATGACTTCGGATCTGAAATCATTCCTGCAGCCGTGGAGGAATACAATGTCCATTCATACTTTTTTGGAGACTATTGGGAAGACATTGGAACAATAAAATCCTTTTTTGATGCTAACCTTGCTCTTACCAAAGAGAATCCAAAGTTCGAATTTTATGATCCCAAGAAACCCATTTTCACATCTCCAGGATTCCTACCACCAACAAAGATTGAGAATTGCAAGATTGTGGATGCAATTATCTCTCACGGATGTTTCCTTAGAGAATCTACAGTCCAACATTCCATTGTTGGTGAACGTTCGCGGTTGGATTATGGCGTTGAGCTTCAGGACACTGTAATGATGGGAGCAGACTATTACCAAACAGAAGCCGAAATTGCTTCTTTGATGGCAGAAGGGAAAGTCCCAATTGGGATTGGAAGGAACACCAAAATTAGGAACTGCATTATTGACAAGAATGCAAAGATCGGGAAAGATGTCATCATTGCAAACAGAGAAGGAGTTGAAGAAGCAGATAGGTCAGCAGATGGGTTCTACATTCGATCAGGAATCACCGTTGTAATGGAAAAGGCAACAATACAAGATAGCACCGTCATATGA	1575	0.4298	MASACVTFQANTHLPNTEKGDIFHQENGFFGERIKRSFNSSPCVVKAAHKWVKPGGVSAVLTSKNSTKQTLNQTLQVPSFLKKKVGADPNNVVSIILGGGSGAHLFPLTKRAATPAVPVGGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGISFGDGFVEVLAATQTPGEAGKNWFQGTADAVRQFTWVFEDAKNRNVENVLILAGDHLYRMDYMDLVQSHVDRNADITVSCAAVGESRASDYGLVKVDDTGRVIQFSEKPKDDDLKAMHVDTSFLGLSPQDASMSPYVASMGVYVFKTDVLLDLLKWRYPASNDFGSEIIPAAVEEYNVHSYFFGDYWEDIGTIKSFFDANLALTKENPKFEFYDPKKPIFTSPGFLPPTKIENCKIVDAIISHGCFLRESTVQHSIVGERSRLDYGVELQDTVMMGADYYQTEAEIASLMAEGKVPIGIGRNTKIRNCIIDKNAKIGKDVIIANREGVEEADRSADGFYIRSGITVVMEKATIQDSTVI	524

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst7g02298	524	CDD	ADP_Glucose_PP	95	355	-	-
	Arst7g02298	524	ProSitePatterns	ADP-glucose pyrophosphorylase signature 2.	188	196	IPR005836	GO:0005978\|GO:0008878
	Arst7g02298	524	ProSitePatterns	ADP-glucose pyrophosphorylase signature 1.	98	117	IPR005836	GO:0005978\|GO:0008878
	Arst7g02298	524	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	82	389	IPR029044	-
	Arst7g02298	524	Pfam	Nucleotidyl transferase	94	370	IPR005835	GO:0009058
	Arst7g02298	524	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	92	485	IPR029044	-
	Arst7g02298	524	ProSitePatterns	ADP-glucose pyrophosphorylase signature 3.	303	313	IPR005836	GO:0005978\|GO:0008878
	Arst7g02298	524	NCBIfam	glucose-1-phosphate adenylyltransferase	92	488	IPR011831	GO:0005978\|GO:0008878
	Arst7g02298	524	Gene3D	Hexapeptide repeat proteins	390	524	-	-
	Arst7g02298	524	FunFam	Glucose-1-phosphate adenylyltransferase	75	389	-	-
	Arst7g02298	524	CDD	LbH_G1P_AT_C	392	518	-	-
	Arst7g02298	524	FunFam	Glucose-1-phosphate adenylyltransferase	390	524	-	-
	Arst7g02298	524	SUPERFAMILY	Trimeric LpxA-like enzymes	387	524	IPR011004	-
	Arst7g02298	524	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED	52	524	IPR011831	GO:0005978\|GO:0008878

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst7g02298	Arst-Chr7	53807048	53810255	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst7g02298	K00975		-	gmx:100814910	857.055

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst7g02298	7	53807048	53810255	Arst7g02298	7	53807048	53810255	ECH