Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02295 ATGGATAATATGGCGTCTTCAAGATCCAACAAGAAGAGAAAGAGCTCCGTCAACATTCTAGATGTTCGTCAGGCTTCGGAGCTGCATGCCGTTGAATCCTTTCGCCAAGTTTTGATTATTCACCAATTGCTTCCTCAAAAATATGATGATTACCACATCATGCTAAGATTTCTAAAGGCAAGGAAGTTTGATATTGAAAAGGCAAAGAAGATGTGGAGGGATATGGTGGAATGGAGAAGGGAGTTTGGAGCTGATAGCATCATGGAGGATTTTGAATTCAAAGAGTTAAATGAAGTAGTGAAGTATTATCCACACGGCCATCACGGTGTTAATAAGGAGGGAAGACCTGTTTACATTGAAAGACTCGGAAATGTTGATCCAAACAAACTCATGCAAGTCACAACTCTCGATAGATATCTCAGGTATCACGTTTACGAGTTTGAGAAAGCTTTTGCAATCAAGTTTCCTGCTTGCTCCATTGCTGCTAACACCCACATAGATTCAAGCACTGCCATCTTGGATGTTCACGGCCTCGGCCTTAAGAATCTTACCAAGCCTGCACGAGACCTCATTACACGATTGCTCAAGATTGATGCTGATTATTATCCTGAGACATTATGCCAAATGTTTATTATAAATGCTGGCCCTGGATTTAGGCTGTTATGGAACACTATTAAGTCTTTTCTTGATCCCAAAACAACTTCAAAGATTCAAGTTCTTGGAAACAAGTACAAGAGCAAATTACTTGAAGTAATTGATGCCAGCGAATTGCCAGAATTTCTAGGGGGAACCTGCAGTTGTGTTGAGCATGGAGGTTGCCTTAAATCAGATAAAGGCCCTTGGAGAAACCCTGATATATTGAAGATGATTTTCAATGGAGAAGCACAATTGGCAAGACAAGTAGTCAAGGTTATAAATAGTGAAGATAAAGTCATTACATATGCCAAAGCCAAAACTCGACCTCCATTGCATGTAAAAGGCAACGATACAACCATAGTTGAATCAAGCTCAGAGGATGAAGATATAACTTGTCCAAATGCCATGAATAACTGCTACTCGAACCTTAGTTTGAAACCTGTTCATGAAGAAGCTAAGGTAGCTGGAACGTCAAGCCATCGAATAAATAACTTGTCTGGGTATGATGAATGCATTATTCCAATGGTGGACAAACTTGTGGATGCAGTTTCGAAGAATCCATCTCAACAAAGTTCTTATACTTTAAAAGGTAGAGGTACAGATGGAGCTCCAGAAAGGAATGAAGCTCAGATTTGGATAGAGCTAATAACTGTGTTGTTGTTTACTCTATTTACTTGCTTCCGTTCAATTGCACTCCGTTTGAACAAGAGACTTCCTCATATATCATCATCTAATAATGTTGATCATAGTGGTTTAGAGTCCACTCTTGATGCAACAAACAAGGAGCTTCCTATTACACCATCAAGTTCCACAGATACAAAGGAAAATGTTCTTCCTTCCATGTTGGAGAGGACATGTGAGCTTGAAGACAAGGTTGAGATGCCTCGTGACAGAGAAGAATCTTTAAATGCTGCTGTCTCCAACGTGGATACATTGGAAGCAGAGTTAAGTGCTACTAAAAAGGCTCTGGATGAAGCGTTAATGAGGCAACAAGAGTTGCTTGATTACATTGATCGTCAAGTTGAAGCCAAGTTTCAGAAAAAGAAGTTTTGTTGGTGCTGA 1698 0.3987 MDNMASSRSNKKRKSSVNILDVRQASELHAVESFRQVLIIHQLLPQKYDDYHIMLRFLKARKFDIEKAKKMWRDMVEWRREFGADSIMEDFEFKELNEVVKYYPHGHHGVNKEGRPVYIERLGNVDPNKLMQVTTLDRYLRYHVYEFEKAFAIKFPACSIAANTHIDSSTAILDVHGLGLKNLTKPARDLITRLLKIDADYYPETLCQMFIINAGPGFRLLWNTIKSFLDPKTTSKIQVLGNKYKSKLLEVIDASELPEFLGGTCSCVEHGGCLKSDKGPWRNPDILKMIFNGEAQLARQVVKVINSEDKVITYAKAKTRPPLHVKGNDTTIVESSSEDEDITCPNAMNNCYSNLSLKPVHEEAKVAGTSSHRINNLSGYDECIIPMVDKLVDAVSKNPSQQSSYTLKGRGTDGAPERNEAQIWIELITVLLFTLFTCFRSIALRLNKRLPHISSSNNVDHSGLESTLDATNKELPITPSSSTDTKENVLPSMLERTCELEDKVEMPRDREESLNAAVSNVDTLEAELSATKKALDEALMRQQELLDYIDRQVEAKFQKKKFCWC 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02295 565 Pfam CRAL/TRIO domain 102 263 IPR001251 -
Arst7g02295 565 SUPERFAMILY CRAL/TRIO domain 95 288 IPR036865 -
Arst7g02295 565 PRINTS Cellular retinaldehyde-binding protein signature 53 75 - -
Arst7g02295 565 PRINTS Cellular retinaldehyde-binding protein signature 222 241 - -
Arst7g02295 565 PRINTS Cellular retinaldehyde-binding protein signature 255 264 - -
Arst7g02295 565 SMART sec14_4 95 266 IPR001251 -
Arst7g02295 565 FunFam SEC14 cytosolic factor 83 295 - -
Arst7g02295 565 Coils Coil 514 541 - -
Arst7g02295 565 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 95 269 IPR001251 -
Arst7g02295 565 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 9 552 - -
Arst7g02295 565 SUPERFAMILY CRAL/TRIO N-terminal domain 25 91 IPR036273 -
Arst7g02295 565 Gene3D - 83 294 IPR036865 -
Arst7g02295 565 SMART CRAL_TRIO_N_2 50 75 IPR011074 -
Arst7g02295 565 Pfam CRAL/TRIO, N-terminal domain 51 74 IPR011074 -
Arst7g02295 565 Gene3D - 1 82 - -
Arst7g02295 565 CDD SEC14 93 264 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02295 Arst-Chr7 53794187 53798437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02295 40 260 Acyl Lipid Metabolism Gene Families AT1G55840 31.718 5.78e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02295 K26544 - ahf:112767041 1084.32