Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02270 ATGGGGAGTTTGGGAGCGGTTATGAAACACCCTGACGACCTTTTTCCGCTGGTGAAGCTGAAGATGGCAATGAGGCACGCCGAGAAGCAGATCCCTCCACAGCCTCACTGGTGTTTCTGCTACACTATGCTCCAGAAGGTTTCTAGAAGCTTCGCCCTCGTCATTCAGCAGCTCGACACTGACCTCCGTAACGCCGTTTGCATATTCTATTTGGTTCTTCGAGCCCTAGATACCGTCGAGGATGATACAAGCGTAGCTACGGATGTGAAGGTTCCAATTCTGATAGCATTTCATCGTCACGTATATGATCGTGATTGGCACTTTTCATGTGGCACAAAGGAGTACAAAATCCTCATGGACCAGTTTCATCACGTTTCTACTGCATTTTTAGAACTTGGAAGGAACTACCAGGAAGCAATTGAAGATATTACCAAAAGAATGGGTGCAGGAATGGCCAAATTTATTTGCAAGGAGGTAGAAACAATTGATGACTATGATGAATATTGTCATTATGTGGCAGGACTTGTTGGGTTAGGTTTATCTAAGCTTTTCCATGCCTCTGGTTCAGAAGATTTGGCTCCAGACCACCTTTCCAATTCAATGGGTCTGTTTCTTCAGAAAACAAACATCATTAGAGATTATCTTGAAGACATCAACGAGATCCCGAAGTCACGCATGTTTTGGCCTCGGCAGATCTGGAGTAAATATGTAGACAAACTTGAGGATTTGAAGTATGAGGAGAACTCAGTTAAAGCAGTGCAATGCTTGAATGACATGGTCACTAATGCTTTGCTGCATGCTGAAGATTGCTTAAAATACATGTCTGCTTTAAGAGACTTATCTATATTTCGTTTTTGTGCTATTCCCCAGGTCATGGCAATTGGAACACTGGCATTATGCTACAACAATATTGAAGTCTTCAGAGGAGTAGTTAAAATGAGGCGTGGTCTAACTGCAAAGGTGATTGACCGAACAAAGACAATGGCTGATGTCTATGGTTCTTTCTTTGACTTTTCCTGTATGATAAAGTCCAAGGTTGACCAAAATGATCCCAATGCGGCAAAAACATTGAGCAGGCTGGAAGCTATACAGAAAACTTGCAGGGAATCTGGTCTCCTTAGTAAAAGGAAATTATACGTACTGCCAAATAAAGCCAGCTACAGCTCGACCATTATTCTCATACTTCTGATCTTCTTGCCCATCATTTTTGCGTATCTCTCAGCAAACCGCCGGAATAACGAGCTATTCTAG 1251 0.4269 MGSLGAVMKHPDDLFPLVKLKMAMRHAEKQIPPQPHWCFCYTMLQKVSRSFALVIQQLDTDLRNAVCIFYLVLRALDTVEDDTSVATDVKVPILIAFHRHVYDRDWHFSCGTKEYKILMDQFHHVSTAFLELGRNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGSEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKLEDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDLSIFRFCAIPQVMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGSFFDFSCMIKSKVDQNDPNAAKTLSRLEAIQKTCRESGLLSKRKLYVLPNKASYSSTIILILLIFLPIIFAYLSANRRNNELF 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02270 416 NCBIfam squalene synthase 36 367 IPR006449 GO:0004310|GO:0008610
Arst7g02270 416 PANTHER FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE 1 403 IPR044844 GO:0004311
Arst7g02270 416 ProSitePatterns Squalene and phytoene synthases signature 1. 168 183 IPR019845 GO:0016765
Arst7g02270 416 SFLD Squalene/Phytoene Synthase Like 38 325 IPR002060 GO:0009058
Arst7g02270 416 SFLD Squalene/Phytoene Synthase Like 38 325 IPR002060 GO:0009058
Arst7g02270 416 Gene3D Farnesyl Diphosphate Synthase 35 371 IPR008949 -
Arst7g02270 416 CDD Trans_IPPS_HH 39 320 IPR033904 GO:0004311
Arst7g02270 416 Pfam Squalene/phytoene synthase 44 315 IPR002060 GO:0009058
Arst7g02270 416 SUPERFAMILY Terpenoid synthases 38 367 IPR008949 -
Arst7g02270 416 FunFam Squalene synthase 1 34 370 - -
Arst7g02270 416 ProSitePatterns Squalene and phytoene synthases signature 2. 201 229 IPR019845 GO:0016765
Arst7g02270 416 SFLD Isoprenoid Synthase Type I 38 325 - -
Arst7g02270 416 SFLD Isoprenoid Synthase Type I 38 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02270 Arst-Chr7 52456484 52461252 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02270 K00801 - gmx:547940 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02270 7 52456484 52461252 Arst7g02270 7 52456484 52461252 ECH