Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01424 ATGGGATTTGAGAAGATCAAGGTCGACAACCCCATCGTCGAGATGGACGGTGATGAAATGACCAGAGTTATCTGGAAGTCAATCAAGGATAAGCTCATTTTGCCCTTCATGGAGTTGGACATCAAGTATTTTGACCTTGGTCTTCCCTACCGTGATCAGACTGATGATAAAGTTACAGTTGAGAGTGCAGAAGCAACTCTTAAGTATAATGTAGCAATCAAGTGTGCAACTATCACGCCAGATGAGGCTCGAGTGAAGGAATTTGACCTCAAGCAAATGTGGAAGAGTCCAAATGGGACAATTAGGAACATTTTGAATGGAACTGTCTTCAGAGAACCCATTCTTTGCAAAAACGTCCCTCGCCTTGTTCCTGGCTGGACAAAGCCAATATGCATTGGAAGACACGCATTTGGTGATCAATATAGGGCCACTGACACAGTTATTAAAGGAGCTGGGAAATTAAAGCTGGTGTTTGTTCCAGAAAGTGGTGAAAAGACTGAACTAGAGGTTTTTAACTTCACCGGTGAAGGAGGTGTTTCAATGGCTATGTACAACACTGATGAGTCTATCCGTGCTTTTGCTGAGTCTTCTATGGCAACTGCTCTTGAGAAAAAATGGCCTCTTTATCTTAGCACCAAAAACACAATTCTTAAGAAATATGATGGAAGATTCAAGGACATATTCCAAGAAGTGTATGAGAAAAACTGGAAATCAAAGTATGAGGCTGCTGGTATATGGTATGAGCATCGGCTCATTGATGATATGGTGGCGTATGCACTCAAGAGTGAAGGAGGTTACGTATGGGCATGCAAGAACTATGATGGAGATGTCCAGAGTGATTTCTTAGCTCAAGGTTTTGGATCATTGGGTTTGATGACATCTGTATTGGTTTGCCCTGATGGGAAGACTATTGAAGCAGAAGCAGCTCACGGCACAGTAACGCGTCACTATAGGGTTCATCAGAAAGGAGGGGAAACCAGCACAAACAGCATAGCATCCATCTTTGCTTGGACTAGAGGGCTTGCCCACAGGGCAAAATTGGATAACAATGCCAGACTTTTGGATTTCACTCAAAAACTAGAAGCAGCTTGCATTGGAGTAGTGGAGGCCGGGAAGATGACCAAGGATTTGGCACTCATTATTCATGGACCCAAGCTTTCAAGGGAGAATTACCTGAACACCGAGGAGTTCATCGATGCAGTGGCAGCGGAACTGAAAGCACAGCTTTCTGCTTAG 1236 0.4377 MGFEKIKVDNPIVEMDGDEMTRVIWKSIKDKLILPFMELDIKYFDLGLPYRDQTDDKVTVESAEATLKYNVAIKCATITPDEARVKEFDLKQMWKSPNGTIRNILNGTVFREPILCKNVPRLVPGWTKPICIGRHAFGDQYRATDTVIKGAGKLKLVFVPESGEKTELEVFNFTGEGGVSMAMYNTDESIRAFAESSMATALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEKNWKSKYEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRAKLDNNARLLDFTQKLEAACIGVVEAGKMTKDLALIIHGPKLSRENYLNTEEFIDAVAAELKAQLSA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01424 411 FunFam Isocitrate dehydrogenase [NADP] 3 411 - -
Arst7g01424 411 NCBIfam isocitrate dehydrogenase (NADP(+)) 5 410 IPR004790 GO:0004450|GO:0006102
Arst7g01424 411 PIRSF IDH_NADP 1 411 IPR004790 GO:0004450|GO:0006102
Arst7g01424 411 ProSitePatterns Isocitrate and isopropylmalate dehydrogenases signature. 272 291 IPR019818 GO:0000287|GO:0016616|GO:0051287
Arst7g01424 411 Pfam Isocitrate/isopropylmalate dehydrogenase 7 401 IPR024084 -
Arst7g01424 411 PANTHER NADP-SPECIFIC ISOCITRATE DEHYDROGENASE 4 409 IPR004790 GO:0004450|GO:0006102
Arst7g01424 411 Gene3D Isopropylmalate Dehydrogenase 4 411 - -
Arst7g01424 411 SMART Iso_dh_2 11 401 IPR024084 -
Arst7g01424 411 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 3 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01424 Arst-Chr7 14934162 14938616 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01424 K00031 - gmx:100791166 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g01424 7 14934162 14938616 Arst7g01424 7 14934162 14938616 ECH