Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00385 ATGTTCGTCTACAAGGTTCTATACCGTGTTTCCAGAACCATTTCCCGAAGCTCCACGCTTCTCTCTGCTTCGCAAAGGCACCCCCAACACTTTTCAACCTTCTCCAATCACTTCCATTCCCTCCTTCCCCAATCGCAAACCAAGCCTATTCAGGTTCAAGCCAATTTGTTATATCCACCAATAAATCCTTCTCTGGCTCCAAGATTTGGATTTTCTTCATCAGCATCACCTGACGAAAAGGAAAAGGCAAATAATGTGGGAGATTCTACAAATGATGACCCTGCCAAAACAAGGGTGGATGAGAAGGAAATTGATCAGGGTGAACAAGCCAAAGGTGCTGATCAAAGAGAAGAATCAGATTCTGATATAGAGAGTGAAGATCTATCAAGGGATGATTTAATTAAGCTTGTTGCTGAGAAGGAAGAACTTTTGAATTTGAAGCACAAAGAGATTGAGAAAATGCAGGATAAAGTTCTGCGTACTTATGCAGAGATGGAGAATGTCATGGACAGAACTAGACGTGAATCAGAGAATTCAAAAAAATTTGCCATACAGAATTTCGCAAAGAGCTTACTAGATGTTGCGGACAACTTGGGAAGAGCTTCCTCTGTTGTAAAGGAAAGCTTTTCAAAGATTGATGCATCAAACGACTCCTCCGAGTCCGTAAAACTCTTGAAAACACTTTTGGAAGGTGTTGAAATGACAGACAAGCAACTCTCAGAGGTACTTAAAAAGTTTGGTGTTGAAAAATTCGATCCTACAAATGAGCCCTTTGATCCAAATATGCACAATGCCATCTTCCAAGTTCCTGACAGCTCCAAGCCTCCAGGCACCGTTGCTGCTGTTCTCAAGGCAGGATATAAGCTTTATGATCGCGTTATTCGCCCGGCCGAAGTTGGTGTAACCCAAGGTGTGGAGGAGGATAAGAATGCAGCTGAATGA 942 0.4246 MFVYKVLYRVSRTISRSSTLLSASQRHPQHFSTFSNHFHSLLPQSQTKPIQVQANLLYPPINPSLAPRFGFSSSASPDEKEKANNVGDSTNDDPAKTRVDEKEIDQGEQAKGADQREESDSDIESEDLSRDDLIKLVAEKEELLNLKHKEIEKMQDKVLRTYAEMENVMDRTRRESENSKKFAIQNFAKSLLDVADNLGRASSVVKESFSKIDASNDSSESVKLLKTLLEGVEMTDKQLSEVLKKFGVEKFDPTNEPFDPNMHNAIFQVPDSSKPPGTVAAVLKAGYKLYDRVIRPAEVGVTQGVEEDKNAAE 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00385 313 Pfam GrpE 137 302 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Arst7g00385 313 Coils Coil 137 157 - -
Arst7g00385 313 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 139 247 IPR013805 -
Arst7g00385 313 FunFam GrpE protein homolog 247 303 - -
Arst7g00385 313 PRINTS GrpE protein signature 282 301 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Arst7g00385 313 PRINTS GrpE protein signature 255 270 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Arst7g00385 313 PRINTS GrpE protein signature 159 175 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Arst7g00385 313 MobiDBLite consensus disorder prediction 81 118 - -
Arst7g00385 313 Gene3D - 131 246 IPR013805 -
Arst7g00385 313 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 248 303 IPR009012 GO:0006457
Arst7g00385 313 MobiDBLite consensus disorder prediction 68 127 - -
Arst7g00385 313 ProSitePatterns grpE protein signature. 258 301 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Arst7g00385 313 CDD GrpE 152 301 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Arst7g00385 313 FunFam GrpE protein homolog 131 246 - -
Arst7g00385 313 Gene3D Head domain of nucleotide exchange factor GrpE 247 302 IPR009012 GO:0006457
Arst7g00385 313 PANTHER GRPE PROTEIN 14 304 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Arst7g00385 313 Hamap Protein GrpE [grpE]. 100 303 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00385 Arst-Chr7 2416477 2419462 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00385 K03687 - gmx:100803396 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g00385 7 2416477 2419462 Arst7g00385 7 2416477 2419462 ECH