Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00378 ATGTCGAACGAGAACGAACCGGCGAAGCTGCTATTACCGTACCTTCAACGCGCCGATGAGCTGCAAAAGCATGAACCTCTCGTCGCTTATTACTGTCGATTATATGCGATGGAGCGAGGATTAAAGATTCCGCAAAGTGAACGCACCAAGACCACCAATGCTCTGCTTGTTTCGCTCATGAAGCAGCTCGAGAAGGATAAGAAGTCAATCCAGATTGGACCAGAGGATAATCTATATATTGAGGGATTTGCCTTGAATGTGTTTGGAAAAGCAGACAAGCAAGATCGTGCTGGAAGAGCAGACTTGAATACAGCAAAAACATTTTATGCTGCTAGCATCTTTTTCGAGATTCTTAATCAATTTGGAGCACTTCAACCTGATCTGGAACAGAAACAGAAATATGCTGCCTGGAAAGCAGCAGATATAAGAAAGGCTGTGAAAGAAGGAAGGAAGCCCACAGCTGGCCCACCGGCTGGTGATGATGACCTTTCATTTTTACCGAGTACTCCTAATACTACACATAATGTTGGCACCAATGAAACTACTGCAAGTCCTGGACCAGAATCCGATCCGTCACCTAGTTATCATAACCCTGTTGACTACCATAATCTCCCAAGCTCTCATTCTGCACCTCAATTCCATGATACTGCTAATGACCAGCATTTGCCAAACATTCCACCATCTATGCAGTTTCATGATAGAGTAAACAATAATAAGCATTCTTCCAGTGTTTCTCCATCTTCTCAACCTTACACACCTTTCTATCCTTCTCAAGATTACCATCCTCCTCCTCCTTCCCAAGATTATCATTCTCCTCCACCCTCGCAAGATTACCATCCTCCTCCTCCTCCCCAAGATTATCATCCTCCACCACCTGCCCAAGATTACCATTCTCCCCCACTTGCTAGATCAGATAGCTCTTATTCCGAGCATTACAACCATCAGCAGTACTCACCAGAACACTCACAGCATTTAGGCTCAAACTACCCTTCTCAAGAACCTCCATCTTCGCATTCGTATCCACACTTCCAATCGTACCCAAGTTTTACAGAAAGCAGCCTACCATCAGTCCCTTCGAACTATACTTATATTCAAGGGCCTGATCCTTCATACTCTTCACAGTCTGCTCCTCTTACCACAAGTCATTCACCAATTGCTCAGCATAGTTCTGGGAACAAAAACGGAAATATATCAAACACTCAGACATATCAGTATGACAGTAACTACCAGCCAGCACCTGAGAAAATAGCAGAGGCGCATAAGGCCGCAAGATTTGCTGTGGGGGCACTTGCATTTGATGATGTCTCAGTTGCAGTAGACTACTTGAAGAAATCACTTGAGTTGCTGACAAATCCATCAGCTGGTCAATGA 1371 0.4442 MSNENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNALLVSLMKQLEKDKKSIQIGPEDNLYIEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGALQPDLEQKQKYAAWKAADIRKAVKEGRKPTAGPPAGDDDLSFLPSTPNTTHNVGTNETTASPGPESDPSPSYHNPVDYHNLPSSHSAPQFHDTANDQHLPNIPPSMQFHDRVNNNKHSSSVSPSSQPYTPFYPSQDYHPPPPSQDYHSPPPSQDYHPPPPPQDYHPPPPAQDYHSPPLARSDSSYSEHYNHQQYSPEHSQHLGSNYPSQEPPSSHSYPHFQSYPSFTESSLPSVPSNYTYIQGPDPSYSSQSAPLTTSHSPIAQHSSGNKNGNISNTQTYQYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSVAVDYLKKSLELLTNPSAGQ 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00378 456 Pfam Vta1 like 13 148 IPR039431 -
Arst7g00378 456 Gene3D - 4 152 IPR023175 -
Arst7g00378 456 MobiDBLite consensus disorder prediction 256 297 - -
Arst7g00378 456 MobiDBLite consensus disorder prediction 199 255 - -
Arst7g00378 456 MobiDBLite consensus disorder prediction 165 190 - -
Arst7g00378 456 MobiDBLite consensus disorder prediction 147 401 - -
Arst7g00378 456 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 275 452 IPR044538 GO:0032511
Arst7g00378 456 Pfam Vta1 C-terminal domain 413 450 IPR041212 -
Arst7g00378 456 Gene3D Immunoglobulin FC, subunit C 412 451 - -
Arst7g00378 456 MobiDBLite consensus disorder prediction 300 401 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00378 1 118 Glycosyltransferase AT2G31960 25.984 7.51e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00378 K12199 - gmx:100806599 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g00378 7 2392855 2395390 Arst7g00378 7 2392855 2395390 ECH